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7  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: FIMD_ECOLI (P30130)

Summary

This is the summary of UniProt entry FIMD_ECOLI (P30130).

Description: Outer membrane usher protein FimD
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 878 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 45
Pfam PapC_N 48 193
disorder n/a 65 66
Pfam Usher 208 790
disorder n/a 233 234
disorder n/a 378 383
disorder n/a 445 450
low_complexity n/a 652 668
disorder n/a 731 734
low_complexity n/a 764 778
Pfam PapC_C 799 863
disorder n/a 810 814
disorder n/a 856 858

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P30130. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSYLNLRLYQ RNTQCLHIRK HRLAGFFVRL VVACAFAAQA PLSSADLYFN
50
51
PRFLADDPQA VADLSRFENG QELPPGTYRV DIYLNNGYMA TRDVTFNTGD
100
101
SEQGIVPCLT RAQLASMGLN TASVAGMNLL ADDACVPLTT MVQDATAHLD
150
151
VGQQRLNLTI PQAFMSNRAR GYIPPELWDP GINAGLLNYN FSGNSVQNRI
200
201
GGNSHYAYLN LQSGLNIGAW RLRDNTTWSY NSSDRSSGSK NKWQHINTWL
250
251
ERDIIPLRSR LTLGDGYTQG DIFDGINFRG AQLASDDNML PDSQRGFAPV
300
301
IHGIARGTAQ VTIKQNGYDI YNSTVPPGPF TINDIYAAGN SGDLQVTIKE
350
351
ADGSTQIFTV PYSSVPLLQR EGHTRYSITA GEYRSGNAQQ EKTRFFQSTL
400
401
LHGLPAGWTI YGGTQLADRY RAFNFGIGKN MGALGALSVD MTQANSTLPD
450
451
DSQHDGQSVR FLYNKSLNES GTNIQLVGYR YSTSGYFNFA DTTYSRMNGY
500
501
NIETQDGVIQ VKPKFTDYYN LAYNKRGKLQ LTVTQQLGRT STLYLSGSHQ
550
551
TYWGTSNVDE QFQAGLNTAF EDINWTLSYS LTKNAWQKGR DQMLALNVNI
600
601
PFSHWLRSDS KSQWRHASAS YSMSHDLNGR MTNLAGVYGT LLEDNNLSYS
650
651
VQTGYAGGGD GNSGSTGYAT LNYRGGYGNA NIGYSHSDDI KQLYYGVSGG
700
701
VLAHANGVTL GQPLNDTVVL VKAPGAKDAK VENQTGVRTD WRGYAVLPYA
750
751
TEYRENRVAL DTNTLADNVD LDNAVANVVP TRGAIVRAEF KARVGIKLLM
800
801
TLTHNNKPLP FGAMVTSESS QSSGIVADNG QVYLSGMPLA GKVQVKWGEE
850
851
ENAHCVANYQ LPPESQQQLL TQLSAECR                        
878
 

Show the unformatted sequence.

Checksums:
CRC64:B2B86CC44FAB7B0F
MD5:a4f073c7cf200e3cb219ffacecd03226

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
PapC_C 799 - 863 3RFZ B 754 - 818 Jmol OpenAstexViewer
E 754 - 818 Jmol OpenAstexViewer
4J3O D 754 - 818 Jmol OpenAstexViewer
PapC_N 183 - 193 3OHN B 138 - 148 Jmol OpenAstexViewer
184 - 193 3OHN A 139 - 148 Jmol OpenAstexViewer
48 - 167 3BWU D 3 - 122 Jmol OpenAstexViewer
48 - 170 1ZE3 D 3 - 125 Jmol OpenAstexViewer
70 - 170 1ZDX A 25 - 125 Jmol OpenAstexViewer
70 - 184 1ZDV A 25 - 139 Jmol OpenAstexViewer
71 - 193 3RFZ B 26 - 148 Jmol OpenAstexViewer
E 26 - 148 Jmol OpenAstexViewer
4J3O D 26 - 148 Jmol OpenAstexViewer
Usher 208 - 701 3OHN A 163 - 656 Jmol OpenAstexViewer
208 - 703 3OHN B 163 - 658 Jmol OpenAstexViewer
208 - 790 3RFZ B 163 - 745 Jmol OpenAstexViewer
E 163 - 745 Jmol OpenAstexViewer
4J3O D 163 - 745 Jmol OpenAstexViewer