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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YAFC_ECOLI (P30864)

Summary

This is the summary of UniProt entry YAFC_ECOLI (P30864).

Description: Uncharacterized HTH-type transcriptional regulator YafC
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
Length: 304 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 23
Pfam HTH_1 5 64
coiled_coil n/a 70 90
Pfam LysR_substrate 88 294
disorder n/a 300 301

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P30864. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKATSEELAI FVSVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL
50
51
NRTTRQLSLT EEGERYFRRV QSILQEMAAA ESEIMETRNT PRGLLRIDAA
100
101
TPVVLHFLMP LIKPFRERYP EVTLSLVSSE TIINLIERKV DVAIRAGTLT
150
151
DSSLRARPLF NSYRKIIASP DYISRYGKPE TIDDLKQHIC LGFTEPASLN
200
201
TWPIARSDGQ LHEVKYGLSS NSGETLKQLC LSGNGIACLS DYMIDKEIAR
250
251
GELVELMADK VLPVEMPFSA VYYSDRAVST RIRAFIDFLS EHVKTAPGGA
300
301
VREA                                                  
304
 

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Checksums:
CRC64:E7179C36A2264BA9
MD5:0890b81dcd477ce27b91f0297845e1f0

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;