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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: LPTD_ECOLI (P31554)

Summary

This is the summary of UniProt entry LPTD_ECOLI (P31554).

Description: LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 784 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 24
disorder n/a 44 51
Pfam OstA 53 195
disorder n/a 53 57
disorder n/a 80 107
disorder n/a 137 141
disorder n/a 147 152
Pfam LptD 308 697
disorder n/a 428 432

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P31554. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKKRIPTLLA TMIATALYSQ QGLAADLASQ CMLGVPSYDR PLVQGDTNDL
50
51
PVTINADHAK GDYPDDAVFT GSVDIMQGNS RLQADEVQLH QKEAPGQPEP
100
101
VRTVDALGNV HYDDNQVILK GPKGWANLNT KDTNVWEGDY QMVGRQGRGK
150
151
ADLMKQRGEN RYTILDNGSF TSCLPGSDTW SVVGSEIIHD REEQVAEIWN
200
201
ARFKVGPVPI FYSPYLQLPV GDKRRSGFLI PNAKYTTTNY FEFYLPYYWN
250
251
IAPNMDATIT PHYMHRRGNI MWENEFRYLS QAGAGLMELD YLPSDKVYED
300
301
EHPNDDSSRR WLFYWNHSGV MDQVWRFNVD YTKVSDPSYF NDFDNKYGSS
350
351
TDGYATQKFS VGYAVQNFNA TVSTKQFQVF SEQNTSSYSA EPQLDVNYYQ
400
401
NDVGPFDTRI YGQAVHFVNT RDDMPEATRV HLEPTINLPL SNNWGSINTE
450
451
AKLLATHYQQ TNLDWYNSRN TTKLDESVNR VMPQFKVDGK MVFERDMEML
500
501
APGYTQTLEP RAQYLYVPYR DQSDIYNYDS SLLQSDYSGL FRDRTYGGLD
550
551
RIASANQVTT GVTSRIYDDA AVERFNISVG QIYYFTESRT GDDNITWEND
600
601
DKTGSLVWAG DTYWRISERW GLRGGIQYDT RLDNVATSNS SIEYRRDEDR
650
651
LVQLNYRYAS PEYIQATLPK YYSTAEQYKN GISQVGAVAS WPIADRWSIV
700
701
GAYYYDTNAN KQADSMLGVQ YSSCCYAIRV GYERKLNGWD NDKQHAVYDN
750
751
AIGFNIELRG LSSNYGLGTQ EMLRSNILPY QNTL                 
784
 

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Checksums:
CRC64:906EA3FE8F8D3E1E
MD5:b463754221f72713d04e1f23ce27c9cd

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
LptD 308 - 697 4RHB A 308 - 697 Jmol OpenAstexViewer
C 308 - 697 Jmol OpenAstexViewer