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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SSN2_YEAST (P38931)

Summary

This is the summary of UniProt entry SSN2_YEAST (P38931).

Description: Mediator of RNA polymerase II transcription subunit 13
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 1420 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Med13_N 7 280
disorder n/a 78 81
disorder n/a 327 329
disorder n/a 340 343
disorder n/a 346 348
disorder n/a 352 374
disorder n/a 379 381
disorder n/a 389 567
low_complexity n/a 395 410
low_complexity n/a 481 494
low_complexity n/a 495 509
low_complexity n/a 522 537
disorder n/a 569 612
disorder n/a 630 632
disorder n/a 646 700
low_complexity n/a 653 670
disorder n/a 704 705
disorder n/a 712 713
disorder n/a 715 724
disorder n/a 734 741
disorder n/a 743 805
low_complexity n/a 808 820
low_complexity n/a 950 956
coiled_coil n/a 1118 1138
disorder n/a 1119 1136
low_complexity n/a 1119 1135
Pfam Med13_C 1123 1285
low_complexity n/a 1141 1151
low_complexity n/a 1399 1413

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P38931. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSSDASTYRL EDVLSSFYRV EKIKKINYHQ YISKAQNDQW SIQMEFMLRK
50
51
QDPKTLVALL SRDLWCFSIN DDPVPTPPAI EHKPVSPDKI GTFTADYSKP
100
101
NLPPHYALFL KALRRKIYIN LALGSHNKLI QFGNACISLS GVPNYLVQLE
150
151
PHLFVNGDLT VSLCAKNMGL VPMKEENLEE SFLSKHALYL APSGIRMHLA
200
201
PASKQGYLIT PPKHTELLLT TLSVSHGINL QNKKNLKWVA VVPDLGHLNG
250
251
HTPTIASYLT PLLEAKKLVW PLHLIFAQPV ADIENSTSGD PSEFHCLQDA
300
301
LDAIDDFIQL KQTAAYRTPG SSGVLSSNIA GTNPLSSDGA YTEQFQHYKN
350
351
NSISSQPASY HSVQETNKIS PKDFSPNFTG IDKLMLSPSD QFAPAFLNTP
400
401
NNNINENELF NDRKQTTVSN DLENSPLKTE LEANGRSLEK VNNSVSKTGS
450
451
VDTLHNKEGT LEQREQNENL PSDKSDSMVD KELFGEDEDE DLFGDSNKSN
500
501
STNESNKSIS DEITEDMFEM SDEEENNNNK SINKNNKEMH TDLGKDIPFF
550
551
PSSEKPNIRT MSGTTKRLNG KRKYLDIPID EMTLPTSPLY MDPGAPLPVE
600
601
TPRDRRKSVF APLNFNPIIE NNVDNKYKSG GKFSFSPLQK EEALNFDISM
650
651
ADLSSSEEEE DEEENGSSDE DLKSLNVRDD MKPSDNISTN TNIHEPQYIN
700
701
YSSIPSLQDS IIKQENFNSV NDANITSNKE GFNSIWKIPQ NDIPQTESPL
750
751
KTVDSSIQPI ESNIKMTLED NNVTSNPSEF TPNMVNSEIS NLPKDKSGIP
800
801
EFTPADPNLS FESSSSLPFL LRHMPLASIP DIFITPTPVV TISEKEQDIL
850
851
DLIAEQVVTD YNILGNLGIP KIAYRGVKDC QEGLITTTML QLFSTFDRLN
900
901
GNDTISKFYN MKQPYVFVKK HHELIKVKHD SQPFIKFLNF RPPNGIKNFK
950
951
SLLLSSSFKE DCLSFAPTLS QTYINQELGF CELLKLTNED PPGLMYLKAF
1000
1001
DKNKLLLLAA QIVSYCSNNK NSIKNVPPIL IILPLDNATL TELVDKANIF
1050
1051
QVIKNEVCAK MPNIELYLKV IPMDFIRNVL VTVDQYVNVA ISIYNMLPPK
1100
1101
SVKFTHIAHT LPEKVNFRTM QQQQMQQQQQ QQQQQQNNST GSSSIIYYDS
1150
1151
YIHLAYSRSV DKEWVFAALS DSYGQGSMTK TWYVGNSRGK FDDACNQIWN
1200
1201
IALNLASKKF GKICLILTRL NGILPDDELM NWRRLSGRNI HLAVVCVDDN
1250
1251
SKISFIDEDK LYPSFKPIYK DTRFGGRMDM TRLYDYEIRD IDQDIHGIVF
1300
1301
QHPFPLAHSQ HRCAIRSGAL IKFKKCDGDT VWDKFAVNLL NCPHSDSTQL
1350
1351
LETILEEFRN LAALNVWYGL SDGEDGHIPW HILAVKKMMN TLVHTRVKIA
1400
1401
NTSAATVHTA TSSSIILSDK                                 
1420
 

Show the unformatted sequence.

Checksums:
CRC64:7F6CF4BBE0FAC918
MD5:8901dfa37a8c397bf66c773b585b059d