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34  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL3_HUMAN (P39023)

Summary

This is the summary of UniProt entry RL3_HUMAN (P39023).

Description: 60S ribosomal protein L3
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 403 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Ribosomal_L3 1 375
disorder n/a 1 4
disorder n/a 10 20
disorder n/a 25 34
disorder n/a 59 61
low_complexity n/a 221 232
disorder n/a 233 236
disorder n/a 400 401

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P39023. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSHRKFSAPR HGSLGFLPRK RSSRHRGKVK SFPKDDPSKP VHLTAFLGYK
50
51
AGMTHIVREV DRPGSKVNKK EVVEAVTIVE TPPMVVVGIV GYVETPRGLR
100
101
TFKTVFAEHI SDECKRRFYK NWHKSKKKAF TKYCKKWQDE DGKKQLEKDF
150
151
SSMKKYCQVI RVIAHTQMRL LPLRQKKAHL MEIQVNGGTV AEKLDWARER
200
201
LEQQVPVNQV FGQDEMIDVI GVTKGKGYKG VTSRWHTKKL PRKTHRGLRK
250
251
VACIGAWHPA RVAFSVARAG QKGYHHRTEI NKKIYKIGQG YLIKDGKLIK
300
301
NNASTDYDLS DKSINPLGGF VHYGEVTNDF VMLKGCVVGT KKRVLTLRKS
350
351
LLVQTKRRAL EKIDLKFIDT TSKFGHGRFQ TMEEKKAFMG PLKKDRIAKE
400
401
EGA                                                   
403
 

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Checksums:
CRC64:A607CEE75CF62148
MD5:48ed237e2fc0630806b7408938cabf4a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L3 2 - 375 4UG0 LB 2 - 375 NGL View in InterPro
4V6X CB 2 - 375 NGL View in InterPro
5AJ0 AB 2 - 375 NGL View in InterPro
5LKS LB 2 - 375 NGL View in InterPro
5T2C E 2 - 375 NGL View in InterPro
6EK0 LB 2 - 375 NGL View in InterPro
6IP5 1E 2 - 375 NGL View in InterPro
6IP6 1E 2 - 375 NGL View in InterPro
6IP8 1E 2 - 375 NGL View in InterPro
6LQM B 2 - 375 NGL View in InterPro
6LSR B 2 - 375 NGL View in InterPro
6LSS B 2 - 375 NGL View in InterPro
6LU8 B 2 - 375 NGL View in InterPro
6OLE B 2 - 375 NGL View in InterPro
6OLF B 2 - 375 NGL View in InterPro
6OLG AB 2 - 375 NGL View in InterPro
6OLI B 2 - 375 NGL View in InterPro
6OLZ AB 2 - 375 NGL View in InterPro
6OM0 B 2 - 375 NGL View in InterPro
6OM7 B 2 - 375 NGL View in InterPro
6QZP LB 2 - 375 NGL View in InterPro
6W6L B 2 - 375 NGL View in InterPro
6XA1 LB 2 - 375 NGL View in InterPro
6Y0G LB 2 - 375 NGL View in InterPro
6Y2L LB 2 - 375 NGL View in InterPro
6Y57 LB 2 - 375 NGL View in InterPro
6Y6X LB 2 - 375 NGL View in InterPro
6Z6L LB 2 - 375 NGL View in InterPro
6Z6M LB 2 - 375 NGL View in InterPro
6Z6N LB 2 - 375 NGL View in InterPro
6ZM7 LB 2 - 375 NGL View in InterPro
6ZME LB 2 - 375 NGL View in InterPro
6ZMI LB 2 - 375 NGL View in InterPro
6ZMO LB 2 - 375 NGL View in InterPro
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TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.