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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YJIE_ECOLI (P39376)

Summary

This is the summary of UniProt entry YJIE_ECOLI (P39376).

Description: HTH-type transcriptional regulator YjiE
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
Length: 303 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam HTH_1 13 72
Pfam LysR_substrate 96 299
low_complexity n/a 110 121

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P39376. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDDCGAILHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE
50
51
QAIGVELFNR QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ
100
101
RKIKIAAAHS LSLGLLPSII SQMPPLFTWA IEAIDVDEAV DKLREGQSDC
150
151
IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS DEHGEALFNL AQPHFPLLNY
200
201
SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD GCGIAWLPEY
250
251
AIQQEIRSGK LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI
300
301
VLS                                                   
303
 

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Checksums:
CRC64:C6E6926128C694B0
MD5:b8d130ea5458a3d86d9e345c7a3aba6e

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;