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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DAPF_HAEIN (P44859)

Summary

This is the summary of UniProt entry DAPF_HAEIN (P44859).

Description: Diaminopimelate epimerase {ECO:0000303|PubMed:10194362}
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (NCBI taxonomy ID 71421)
Length: 274 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam DAP_epimerase 3 124
Pfam DAP_epimerase 151 267
low_complexity n/a 215 227

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P44859. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQFSKMHGLG NDFVVVDGVT QNVFFTPETI RRLANRHCGI GFDQLLIVEA
50
51
PYDPELDFHY RIFNADGSEV SQCGNGARCF ARFVTLKGLT NKKDISVSTQ
100
101
KGNMVLTVKD DNQIRVNMGE PIWEPAKIPF TANKFEKNYI LRTDIQTVLC
150
151
GAVSMGNPHC VVQVDDIQTA NVEQLGPLLE SHERFPERVN AGFMQIINKE
200
201
HIKLRVYERG AGETQACGSG ACAAVAVGIM QGLLNNNVQV DLPGGSLMIE
250
251
WNGVGHPLYM TGEATHIYDG FITL                            
274
 

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Checksums:
CRC64:321B3CDAFFE81EDA
MD5:cd7e2e5e62d3028f5d94e999a392488b

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
DAP_epimerase 151 - 267 1BWZ A 151 - 267 Jmol OpenAstexViewer
1GQZ A 151 - 267 Jmol OpenAstexViewer
2GKE A 151 - 267 Jmol OpenAstexViewer
2GKJ A 151 - 267 Jmol OpenAstexViewer
2Q9H A 151 - 267 Jmol OpenAstexViewer
2Q9J A 151 - 267 Jmol OpenAstexViewer
3 - 124 1BWZ A 3 - 124 Jmol OpenAstexViewer
1GQZ A 3 - 124 Jmol OpenAstexViewer
2GKE A 3 - 124 Jmol OpenAstexViewer
2GKJ A 3 - 124 Jmol OpenAstexViewer
2Q9H A 3 - 124 Jmol OpenAstexViewer
2Q9J A 3 - 124 Jmol OpenAstexViewer