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11  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RP3A_RAT (P47709)

Summary

This is the summary of UniProt entry RP3A_RAT (P47709).

Description: Rabphilin-3A
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
View Pfam proteome data.
Length: 684 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 7 47
Pfam FYVE_2 44 158
disorder n/a 158 380
low_complexity n/a 246 257
low_complexity n/a 275 301
low_complexity n/a 295 309
low_complexity n/a 354 371
disorder n/a 383 389
Pfam C2 397 506
disorder n/a 402 405
disorder n/a 420 421
disorder n/a 433 443
disorder n/a 450 456
Pfam C2 555 661
low_complexity n/a 589 600
disorder n/a 594 599
disorder n/a 673 676
disorder n/a 680 681
disorder n/a 683 684

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P47709. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTDTVVNRWM YPGDGPLQSN DKEQLQAGWS VHPGAQTDRQ RKQEELTDEE
50
51
KEIINRVIAR AEKMETMEQE RIGRLVDRLE TMRKNVAGDG VNRCILCGEQ
100
101
LGMLGSACVV CEDCKKNVCT KCGVETSNNR PHPVWLCKIC LEQREVWKRS
150
151
GAWFFKGFPK QVLPQPMPIK KTKPQQPAGE PATQEQPTPE SRHPARAPAR
200
201
GDMEDRRAPG QKPGPDLTSA PGRGSHGPPT RRASEARMST TTRDSEGWDH
250
251
GHGGGAGDTS RSPGGEQGLR RANSVQASRP APASMPSPAP PQPVQPGPPG
300
301
GSRAAPGPGR FPEQSTEAPP SDPGYPGAVA PAREERTGPT GGFQAAPHTA
350
351
GPYSQAAPAR QPPPAEEEEE EANSYDSDQA TTLGALEFSL LYDQDNSNLQ
400
401
CTIIRAKGLK PMDSNGLADP YVKLHLLPGA SKSNKLRTKT LRNTRNPVWN
450
451
ETLQYHGITE EDMQRKTLRI SVCDEDKFGH NEFIGETRFS LKKLKANQRK
500
501
NFNICLERVI PMKRAGTTGS ARGMALYEEE QVERIGDIEE RGKILVSLMY
550
551
STQQGGLIVG IIRCVHLAAM DANGYSDPFV KLWLKPDMGK KAKHKTQIKK
600
601
KTLNPEFNEE FFYDIKHSDL AKKSLDISVW DYDIGKSNDY IGGCQLGISA
650
651
KGERLKHWYE CLKNKDKKIE RWHQLQNENH VSSD                 
684
 

Show the unformatted sequence.

Checksums:
CRC64:05838BC3C7A86444
MD5:319636edb2ce9b6efe5454cddd46edc0

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
C2 397 - 506 2CHD A 397 - 506 Jmol OpenAstexViewer
4LT7 A 397 - 506 Jmol OpenAstexViewer
4NP9 A 397 - 506 Jmol OpenAstexViewer
4NS0 A 397 - 506 Jmol OpenAstexViewer
555 - 661 2CM5 A 555 - 661 Jmol OpenAstexViewer
2CM6 A 555 - 661 Jmol OpenAstexViewer
B 1555 - 1661 Jmol OpenAstexViewer
3RPB A 555 - 661 Jmol OpenAstexViewer
5LO8 A 555 - 661 Jmol OpenAstexViewer
B 555 - 661 Jmol OpenAstexViewer
5LOB A 555 - 661 Jmol OpenAstexViewer
B 555 - 661 Jmol OpenAstexViewer
C 555 - 661 Jmol OpenAstexViewer
5LOW A 555 - 661 Jmol OpenAstexViewer
B 555 - 661 Jmol OpenAstexViewer
C 555 - 661 Jmol OpenAstexViewer
H 555 - 661 Jmol OpenAstexViewer
I 555 - 661 Jmol OpenAstexViewer
J 555 - 661 Jmol OpenAstexViewer
FYVE_2 44 - 158 1ZBD B 44 - 158 Jmol OpenAstexViewer