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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DER_BACSU (P50743)

Summary

This is the summary of UniProt entry DER_BACSU (P50743).

Description: GTPase Der
Source organism: Bacillus subtilis (strain 168) (NCBI taxonomy ID 224308)
View Pfam proteome data.
Length: 436 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam MMR_HSR1 5 120
low_complexity n/a 148 156
Pfam MMR_HSR1 177 295
Pfam KH_dom-like 353 433
low_complexity n/a 387 398

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P50743. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGKPVVAIVG RPNVGKSTIF NRIAGERISI VEDTPGVTRD RIYSSAEWLN
50
51
YDFNLIDTGG IDIGDEPFLA QIRQQAEIAM DEADVIIFMV NGREGVTAAD
100
101
EEVAKILYRT KKPVVLAVNK LDNTEMRANI YDFYSLGFGE PYPISGTHGL
150
151
GLGDLLDAVA EHFKNIPETK YNEEVIQFCL IGRPNVGKSS LVNAMLGEER
200
201
VIVSNVAGTT RDAVDTSFTY NQQEFVIVDT AGMRKKGKVY ETTEKYSVLR
250
251
ALKAIDRSEV VAVVLDGEEG IIEQDKRIAG YAHEAGKAVV IVVNKWDAVD
300
301
KDESTMKEFE ENIRDHFQFL DYAPILFMSA LTKKRIHTLM PAIIKASENH
350
351
SLRVQTNVLN DVIMDAVAMN PTPTHNGSRL KIYYATQVSV KPPSFVVFVN
400
401
DPELMHFSYE RFLENRIRDA FGFEGTPIKI FARARK               
436
 

Show the unformatted sequence.

Checksums:
CRC64:A5CC7028FFB5A442
MD5:edc8cc09bda6b49184e76803dd56d0a2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
KH_dom-like 353 - 433 2HJG A 353 - 433 Jmol OpenAstexViewer
4DCS A 353 - 433 Jmol OpenAstexViewer
4DCT A 353 - 433 Jmol OpenAstexViewer
4DCU A 353 - 433 Jmol OpenAstexViewer
4DCV A 353 - 433 Jmol OpenAstexViewer
MMR_HSR1 177 - 295 2HJG A 177 - 295 Jmol OpenAstexViewer
4DCS A 177 - 295 Jmol OpenAstexViewer
4DCT A 177 - 295 Jmol OpenAstexViewer
4DCU A 177 - 295 Jmol OpenAstexViewer
4DCV A 177 - 295 Jmol OpenAstexViewer
5 - 120 2HJG A 5 - 120 Jmol OpenAstexViewer
4DCS A 5 - 120 Jmol OpenAstexViewer
4DCT A 5 - 120 Jmol OpenAstexViewer
4DCU A 5 - 120 Jmol OpenAstexViewer
4DCV A 5 - 120 Jmol OpenAstexViewer
4KYU A 5 - 120 Jmol OpenAstexViewer
B 5 - 120 Jmol OpenAstexViewer