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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RDGB_ECOLI (P52061)

Summary

This is the summary of UniProt entry RDGB_ECOLI (P52061).

Description: dITP/XTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 197 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Ham1p_like 4 193
disorder n/a 99 106
disorder n/a 171 177

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P52061. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQKVVLATGN VGKVRELASL LSDFGLDIVA QTDLGVDSAE ETGLTFIENA
50
51
ILKARHAAKV TALPAIADDS GLAVDVLGGA PGIYSARYSG EDATDQKNLQ
100
101
KLLETMKDVP DDQRQARFHC VLVYLRHAED PTPLVCHGSW PGVITREPAG
150
151
TGGFGYDPIF FVPSEGKTAA ELTREEKSAI SHRGQALKLL LDALRNG   
197
 

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Checksums:
CRC64:74E82A59B1A9E294
MD5:b4c571a990cb9c6ffbe9b5d230d61838

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ham1p_like 4 - 193 1K7K A 4 - 193 Jmol OpenAstexViewer
2PYU A 4 - 193 Jmol OpenAstexViewer
2Q16 A 4 - 193 Jmol OpenAstexViewer
B 4 - 193 Jmol OpenAstexViewer