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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: AP1B1_RAT (P52303)

Summary

This is the summary of UniProt entry AP1B1_RAT (P52303).

Description: AP-1 complex subunit beta-1
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
View Pfam proteome data.
Length: 949 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Adaptin_N 10 534
low_complexity n/a 25 36
disorder n/a 505 507
disorder n/a 584 623
low_complexity n/a 593 615
low_complexity n/a 625 637
disorder n/a 633 634
low_complexity n/a 656 668
disorder n/a 666 667
disorder n/a 669 682
low_complexity n/a 680 696
Pfam Alpha_adaptinC2 723 829
Pfam B2-adapt-app_C 839 947

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P52303. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTDSKYFTTT KKGEIFELKA ELNSDKKEKK KEAVKKVIAS MTVGKDVSAL
50
51
FPDVVNCMQT DNLELKKLVY LYLMNYAKSQ PDMAIMAVNT FVKDCEDPNP
100
101
LIRALAVRTM GCIRVDKITE YLCEPLRKCL KDEDPYVRKT AAVCVAKLHD
150
151
INAQLVEDQG FLDTLKDLIS DSNPMVVANR VAALSEIAES HPSSNLLDLK
200
201
AQSINKLLTA LNECTEWAQI FILDCLGNYM PKDDREAQSI CERVTPRLSH
250
251
ANSAVVLSAV KVLMKFMEML SKDLDYYATL LKKLAPPLVT LLSAEPEPQY
300
301
VPLRNINLIV QKRPEILKHE MKVFFVKYND PIYVKLEKLD IMIRLASQAN
350
351
IAQVLAELKE YATEVDVDFV RKAVRAIGRC AIKVEQSAER CVSTLLDLIQ
400
401
TKVNYVVQEA IVVIKDIFRK YPNKYESVIA TLCENLDSLD EPEARAAMIW
450
451
IVGEYAERID NADELLESFL DGFHDESTQV QLQLLTAIVK LFLKKPTETQ
500
501
ELVQQVLSLA TQDSDNPDLR DRGYIYWRLL STDPVAAKEV VLAEKPLISE
550
551
ETDLIEPTLL DELICYIGTL ASVYHKPPNA FVEGGRGVVH KSLPPRTASS
600
601
ESTESPEAAP AGAPASDQPD VIPAQGDLLG DLLNLDLGPP VSGPPLAASS
650
651
VQMGAVDLLG GGLDSLMGDE PEGIGDSNFG APPASVAAAA PARLGAPVSS
700
701
GLSDLFDLTS GVGTLSGSYV APKAVWLPAM KAKGLEISGT FTRQVGSISM
750
751
DLQLTNKALQ VMTDFAIQFN RNSFGLAPAA PLQVHAPLSP NQTVEISLPL
800
801
NTVGSVMKME PLNNLQVAVK NNIDVFYFST LYPLHVLFVE DGKMDRQMFL
850
851
ATWKDIPNEN EAQFQIRDCP LNTEAASSKL QSSNIFTVAK RTVEGQDMLY
900
901
QSLKLTNGIW VLAELRIQPG NPSFTLSLKC RAPEVSQHDI QAYETILKN 
949
 

Show the unformatted sequence.

Checksums:
CRC64:CC5AE54E8AACCD44
MD5:4237936274191bed6a64d69188303eb7

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Adaptin_N 10 - 534 1W63 B 10 - 534 Jmol OpenAstexViewer
D 10 - 534 Jmol OpenAstexViewer
F 10 - 534 Jmol OpenAstexViewer
H 10 - 534 Jmol OpenAstexViewer
J 10 - 534 Jmol OpenAstexViewer
L 10 - 534 Jmol OpenAstexViewer