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11  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS11_HUMAN (P62280)

Summary

This is the summary of UniProt entry RS11_HUMAN (P62280).

Description: 40S ribosomal protein S11
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 158 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Ribosomal_S17_N 5 73
Pfam Ribosomal_S17 75 144

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P62280. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MADIQTERAY QKQPTIFQNK KRVLLGETGK EKLPRYYKNI GLGFKTPKEA
50
51
IEGTYIDKKC PFTGNVSIRG RILSGVVTKM KMQRTIVIRR DYLHYIRKYN
100
101
RFEKRHKNMS VHLSPCFRDV QIGDIVTVGE CRPLSKTVRF NVLKVTKAAG
150
151
TKKQFQKF                                              
158
 

Show the unformatted sequence.

Checksums:
CRC64:9FB75DC1D99614B0
MD5:62d32b8f3a734f3d1ca446cc46db0d66

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S17 75 - 144 4UG0 SL 75 - 144 Jmol OpenAstexViewer
4V6X AL 75 - 144 Jmol OpenAstexViewer
5A2Q L 75 - 144 Jmol OpenAstexViewer
5AJ0 BL 75 - 144 Jmol OpenAstexViewer
5FLX L 75 - 144 Jmol OpenAstexViewer
5LKS SL 75 - 144 Jmol OpenAstexViewer
5OA3 L 75 - 144 Jmol OpenAstexViewer
5T2C Aw 75 - 144 Jmol OpenAstexViewer
5VYC L1 75 - 144 Jmol OpenAstexViewer
L2 75 - 144 Jmol OpenAstexViewer
L3 75 - 144 Jmol OpenAstexViewer
L4 75 - 144 Jmol OpenAstexViewer
L5 75 - 144 Jmol OpenAstexViewer
L6 75 - 144 Jmol OpenAstexViewer
6EK0 SL 75 - 144 Jmol OpenAstexViewer
6FEC G 75 - 144 Jmol OpenAstexViewer
Ribosomal_S17_N 5 - 73 4UG0 SL 5 - 73 Jmol OpenAstexViewer
4V6X AL 5 - 73 Jmol OpenAstexViewer
5A2Q L 5 - 73 Jmol OpenAstexViewer
5LKS SL 5 - 73 Jmol OpenAstexViewer
5OA3 L 5 - 73 Jmol OpenAstexViewer
5T2C Aw 5 - 73 Jmol OpenAstexViewer
5VYC L1 5 - 73 Jmol OpenAstexViewer
L2 5 - 73 Jmol OpenAstexViewer
L3 5 - 73 Jmol OpenAstexViewer
L4 5 - 73 Jmol OpenAstexViewer
L5 5 - 73 Jmol OpenAstexViewer
L6 5 - 73 Jmol OpenAstexViewer
6EK0 SL 5 - 73 Jmol OpenAstexViewer
6FEC G 5 - 73 Jmol OpenAstexViewer
6 - 73 5AJ0 BL 6 - 73 Jmol OpenAstexViewer
5FLX L 6 - 73 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.