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27  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RUXF_HUMAN (P62306)

Summary

This is the summary of UniProt entry RUXF_HUMAN (P62306).

Description: Small nuclear ribonucleoprotein F
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 86 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam LSM 9 74
low_complexity n/a 75 85
disorder n/a 81 86

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P62306. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSLPLNPKPF LNGLTGKPVM VKLKWGMEYK GYLVSVDGYM NMQLANTEEY
50
51
IDGALSGHLG EVLIRCNNVL YIRGVEEEEE DGEMRE               
86
 

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Checksums:
CRC64:416B88D575DAE58A
MD5:7e58edc962ba9545de21a9cda848f96d

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
LSM 9 - 74 3CW1 1 409 - 474 Jmol OpenAstexViewer
2 609 - 674 Jmol OpenAstexViewer
F 9 - 74 Jmol OpenAstexViewer
Z 209 - 274 Jmol OpenAstexViewer
3JCR T 9 - 74 Jmol OpenAstexViewer
t 9 - 74 Jmol OpenAstexViewer
3PGW F 9 - 74 Jmol OpenAstexViewer
I 9 - 74 Jmol OpenAstexViewer
4PJO F 9 - 74 Jmol OpenAstexViewer
f 9 - 74 Jmol OpenAstexViewer
T 9 - 74 Jmol OpenAstexViewer
t 9 - 74 Jmol OpenAstexViewer
4V98 Ab 4003 - 4068 Jmol OpenAstexViewer
AD 4003 - 4068 Jmol OpenAstexViewer
Aj 4003 - 4068 Jmol OpenAstexViewer
AL 4003 - 4068 Jmol OpenAstexViewer
Ar 4003 - 4068 Jmol OpenAstexViewer
AT 4003 - 4068 Jmol OpenAstexViewer
Az 4003 - 4068 Jmol OpenAstexViewer
Bb 4003 - 4068 Jmol OpenAstexViewer
BD 4003 - 4068 Jmol OpenAstexViewer
Bj 4003 - 4068 Jmol OpenAstexViewer
BL 4003 - 4068 Jmol OpenAstexViewer
Br 4003 - 4068 Jmol OpenAstexViewer
BT 4003 - 4068 Jmol OpenAstexViewer
Bz 4003 - 4068 Jmol OpenAstexViewer
Cb 4003 - 4068 Jmol OpenAstexViewer
CD 4003 - 4068 Jmol OpenAstexViewer
Cj 4003 - 4068 Jmol OpenAstexViewer
CL 4003 - 4068 Jmol OpenAstexViewer
Cr 4003 - 4068 Jmol OpenAstexViewer
CT 4003 - 4068 Jmol OpenAstexViewer
4WZJ F 9 - 74 Jmol OpenAstexViewer
FF 9 - 74 Jmol OpenAstexViewer
FFF 9 - 74 Jmol OpenAstexViewer
FFFF 9 - 74 Jmol OpenAstexViewer
M 9 - 74 Jmol OpenAstexViewer
MM 9 - 74 Jmol OpenAstexViewer
MMM 9 - 74 Jmol OpenAstexViewer
MMMM 9 - 74 Jmol OpenAstexViewer
T 9 - 74 Jmol OpenAstexViewer
TT 9 - 74 Jmol OpenAstexViewer
TTT 9 - 74 Jmol OpenAstexViewer
TTTT 9 - 74 Jmol OpenAstexViewer
5MQF b 9 - 74 Jmol OpenAstexViewer
i 9 - 74 Jmol OpenAstexViewer
5O9Z b 9 - 74 Jmol OpenAstexViewer
i 9 - 74 Jmol OpenAstexViewer
T 9 - 74 Jmol OpenAstexViewer
5XJC f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
5XJL F 9 - 74 Jmol OpenAstexViewer
5XJQ F 9 - 74 Jmol OpenAstexViewer
5XJR F 9 - 74 Jmol OpenAstexViewer
5XJS F 9 - 74 Jmol OpenAstexViewer
5XJT F 9 - 74 Jmol OpenAstexViewer
5XJU F 9 - 74 Jmol OpenAstexViewer
5YZG f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
5Z56 f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
5Z57 f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
5Z58 f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
6AH0 b 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
Q 9 - 74 Jmol OpenAstexViewer
6FF7 b 9 - 74 Jmol OpenAstexViewer
i 9 - 74 Jmol OpenAstexViewer
6ICZ f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
6ID0 f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
6ID1 f 9 - 74 Jmol OpenAstexViewer
m 9 - 74 Jmol OpenAstexViewer
6QDV f 9 - 74 Jmol OpenAstexViewer
q 9 - 74 Jmol OpenAstexViewer
6QW6 4f 9 - 74 Jmol OpenAstexViewer
5f 9 - 74 Jmol OpenAstexViewer
6QX9 1f 9 - 74 Jmol OpenAstexViewer
2f 9 - 74 Jmol OpenAstexViewer
4f 9 - 74 Jmol OpenAstexViewer
5f 9 - 74 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.