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18  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: ISPF_ECOLI (P62617)

Summary

This is the summary of UniProt entry ISPF_ECOLI (P62617).

Description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase EC=4.6.1.12
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 159 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam YgbB 1 155
low_complexity n/a 39 59

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P62617. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRIGHGFDVH AFGGEGPIII GGVRIPYEKG LLAHSDGDVA LHALTDALLG
50
51
AAALGDIGKL FPDTDPAFKG ADSRELLREA WRRIQAKGYT LGNVDVTIIA
100
101
QAPKMLPHIP QMRVFIAEDL GCHMDDVNVK ATTTEKLGFT GRGEGIACEA
150
151
VALLIKATK                                             
159
 

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Checksums:
CRC64:9FC5563623A62939
MD5:1474cda41f35e53ff58f26dc76c9adc5

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
YgbB 1 - 155 1GX1 A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
1H47 A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
D 1 - 155 Jmol OpenAstexViewer
E 1 - 155 Jmol OpenAstexViewer
F 1 - 155 Jmol OpenAstexViewer
1H48 A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
D 1 - 155 Jmol OpenAstexViewer
E 1 - 155 Jmol OpenAstexViewer
F 1 - 155 Jmol OpenAstexViewer
1JY8 A 1 - 155 Jmol OpenAstexViewer
1KNJ A 1 - 155 Jmol OpenAstexViewer
1KNK A 1 - 155 Jmol OpenAstexViewer
1U3L A 1 - 155 Jmol OpenAstexViewer
1U3P A 1 - 155 Jmol OpenAstexViewer
1U40 A 1 - 155 Jmol OpenAstexViewer
1U43 A 1 - 155 Jmol OpenAstexViewer
1YQN A 1 - 155 Jmol OpenAstexViewer
2AMT A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
D 1 - 155 Jmol OpenAstexViewer
E 1 - 155 Jmol OpenAstexViewer
F 1 - 155 Jmol OpenAstexViewer
2GZL A 1 - 155 Jmol OpenAstexViewer
3ELC A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
3EOR A 1 - 155 Jmol OpenAstexViewer
3ERN A 1 - 155 Jmol OpenAstexViewer
B 1 - 155 Jmol OpenAstexViewer
C 1 - 155 Jmol OpenAstexViewer
D 1 - 155 Jmol OpenAstexViewer
E 1 - 155 Jmol OpenAstexViewer
F 1 - 155 Jmol OpenAstexViewer
3ESJ A 1 - 155 Jmol OpenAstexViewer
3FBA A 1 - 155 Jmol OpenAstexViewer