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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YDHF_ECOLI (P76187)

Summary

This is the summary of UniProt entry YDHF_ECOLI (P76187).

Description: Oxidoreductase YdhF EC=1.-.-.-
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 298 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Aldo_ket_red 16 293
low_complexity n/a 187 201

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P76187. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVQRITIAPQ GPEFSRFVMG YWRLMDWNMS ARQLVSFIEE HLDLGVTTVD
50
51
HADIYGGYQC EAAFGEALKL APHLRERMEI VSKCGIATTA REENVIGHYI
100
101
TDRDHIIKSA EQSLINLATD HLDLLLIHRP DPLMDADEVA DAFKHLHQSG
150
151
KVRHFGVSNF TPAQFALLQS RLPFTLATNQ VEISPVHQPL LLDGTLDQLQ
200
201
QLRVRPMAWS CLGGGRLFND DYFQPLRDEL AVVAEELNAG SIEQVVYAWV
250
251
LRLPSQPLPI IGSGKIERVR AAVEAETLKM TRQQWFRIRK AALGYDVP  
298
 

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Checksums:
CRC64:984DACC2C04A6D9F
MD5:260d44bed7fa8dcab1d896019c54f35a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Aldo_ket_red 16 - 293 1OG6 A 16 - 293 Jmol OpenAstexViewer
B 16 - 293 Jmol OpenAstexViewer
C 16 - 293 Jmol OpenAstexViewer
1UR3 M 16 - 293 Jmol OpenAstexViewer