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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YFHM_ECOLI (P76578)

Summary

This is the summary of UniProt entry YFHM_ECOLI (P76578).

Description: Uncharacterized lipoprotein YfhM
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 1653 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 18
low_complexity n/a 6 15
disorder n/a 23 54
low_complexity n/a 38 47
Pfam bMG1 59 163
low_complexity n/a 190 201
Pfam bMG3 289 383
disorder n/a 334 340
low_complexity n/a 362 373
Pfam MG2 387 479
disorder n/a 420 421
Pfam bMG5 485 610
disorder n/a 490 494
disorder n/a 563 565
disorder n/a 567 575
disorder n/a 604 605
Pfam bMG6 616 741
disorder n/a 691 692
disorder n/a 754 755
Pfam A2M_BRD 758 906
disorder n/a 861 866
disorder n/a 872 883
disorder n/a 890 891
disorder n/a 953 956
disorder n/a 958 960
Pfam A2M 970 1057
Pfam TED_complement 1165 1314
disorder n/a 1363 1365
low_complexity n/a 1390 1401
disorder n/a 1452 1454
disorder n/a 1456 1460
disorder n/a 1467 1472
Pfam bMG10 1505 1638
disorder n/a 1562 1564
disorder n/a 1566 1568
coiled_coil n/a 1569 1589

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P76578. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKKLRVAACM LMLALAGCDN NDNAPTAVKK DAPSEVTKAA SSENASSAKL
50
51
SVPERQKLAQ QSAGKVLTLL DLSEVQLDGA ATLVLTFSIP LDPDQDFSRV
100
101
IHVVDKKSGK VDGAWELSDN LKELRLRHLE PKRDLIVTIG KEVKALNNAT
150
151
FSKDYEKTIT TRDIQPSVGF ASRGSLLPGK VVEGLPVMAL NVNNVDVNFF
200
201
RVKPESLPAF ISQWEYRNSL ANWQSDKLLQ MADLVYTGRF DLNPARNTRE
250
251
KLLLPLGDIK PLQQAGVYLA VMNQAGRYDY SNPATLFTLS DIGVSAHRYH
300
301
NRLDIFTQSL ENGAAQQGIE VSLLNEKGQT LTQATSDAQG HVQLENDKNA
350
351
ALLLARKDGQ TTLLDLKLPA LDLAEFNIAG APGYSKQFFM FGPRDLYRPG
400
401
ETVILNGLLR DADGKALPNQ PIKLDVIKPD GQVLRSVVSQ PENGLYHFTW
450
451
PLDSNAATGM WHIRANTGDN QYRMWDFHVE DFMPERMALN LTGEKTPLTP
500
501
KDEVKFSVVG YYLYGAPANG NTLQGQLFLR PLREAVSALP GFEFGDIAAE
550
551
NLSRTLDEVQ LTLDDKGRGE VSTESQWKET HSPLQVIFQG SLLESGGRPV
600
601
TRRAEQAIWP ADALPGIRPQ FASKSVYDYR TDSTVKQPIV DEGSNAAFDI
650
651
VYSDAQGVKK AVSGLQVRLI RERRDYYWNW SEDEGWQSQF DQKDLIENEQ
700
701
TLDLKADETG KVSFPVEWGA YRLEVKAPNE AVSSVRFWAG YSWQDNSDGS
750
751
GAVRPDRVTL KLDKASYRPG DTIKLHIAAP TAGKGYAMVE SSEGPLWWQE
800
801
IDVRAQGLDL TIPVDKTWNR HDLYLSTLVV RPGDKSRSAT PKRAVGVLHL
850
851
PLGDENRRLD LALETPAKMR PNQPLTVKIK ASTKNGEKPK QVNVLVSAVD
900
901
SGVLNITDYV TPDPWQAFFG QKRYGADIYD IYGQVIEGQG RLAALRFGGD
950
951
GDELKRGGKP PVNHVNIVVQ QALPVTLNEQ GEGSVTLPIG DFNGELRVMA
1000
1001
QAWTADDFGS NESKVIVAAP VIAELNMPRF MASGDTSRLT LDITNLTDKP
1050
1051
QKLNVALTAS GLLELVSDSP AAVELAPGVR TTLFIPVRAL PGYGDGEIQA
1100
1101
TISGLALPGE TVADQHKQWK IGVRPAFPAQ TVNYGTALQP GETWAIPADG
1150
1151
LQNFSPVTLE GQLLLSGKPP LNIARYIKEL KAYPYGCLEQ TASGLFPSLY
1200
1201
TNAAQLQALG IKGDSDEKRR ASVDIGISRL LQMQRDNGGF ALWDKNGDEE
1250
1251
YWLTAYVMDF LVRAGEQGYS VPTDAINRGN ERLLRYLQDP GMMSIPYADN
1300
1301
LKASKFAVQS YAALVLARQQ KAPLGALREI WEHRADAASG LPLLQLGVAL
1350
1351
KTMGDATRGE EAIALALKTP RNSDERIWLG DYGSSLRDNA LMLSLLEENK
1400
1401
LLPDEQYTLL NTLSQQAFGE RWLSTQESNA LFLAARTIQD LPGKWQAQTS
1450
1451
FSAEQLTGEK AQNSNLNSDQ LVTLQVSNSG DQPLWLRMDA SGYPQSAPLP
1500
1501
ANNVLQIERH ILGTDGKSKS LDSLRSGDLV LVWLQVKASN SVPDALVVDL
1550
1551
LPAGLELENQ NLANGSASLE QSGGEVQNLL NQMQQASIKH IEFRDDRFVA
1600
1601
AVAVDEYQPV TLVYLARAVT PGTYQVPQPM VESMYVPQWR ATGAAEDLLI
1650
1651
VRP                                                   
1653
 

Show the unformatted sequence.

Checksums:
CRC64:13109EC5CDEB41A0
MD5:ccf7fe58ed76ae90b1f0c32dcd7a8425

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
A2M 1018 - 1057 4ZIU A 1018 - 1057 Jmol OpenAstexViewer
970 - 1057 4RTD A 970 - 1057 Jmol OpenAstexViewer
4ZIQ A 970 - 1057 Jmol OpenAstexViewer
5A42 A 970 - 1057 Jmol OpenAstexViewer
A2M_BRD 758 - 906 4ZIQ A 758 - 906 Jmol OpenAstexViewer
5A42 A 758 - 906 Jmol OpenAstexViewer
855 - 906 4RTD A 855 - 906 Jmol OpenAstexViewer
bMG1 59 - 163 4ZJG A 59 - 163 Jmol OpenAstexViewer
5A42 A 59 - 163 Jmol OpenAstexViewer
bMG10 1505 - 1638 4RTD A 1505 - 1638 Jmol OpenAstexViewer
4ZIQ A 1505 - 1638 Jmol OpenAstexViewer
4ZIU A 1505 - 1638 Jmol OpenAstexViewer
5A42 A 1505 - 1638 Jmol OpenAstexViewer
bMG3 289 - 367 4ZJG A 289 - 367 Jmol OpenAstexViewer
289 - 368 4ZJH A 289 - 368 Jmol OpenAstexViewer
289 - 383 4ZIQ A 289 - 383 Jmol OpenAstexViewer
5A42 A 289 - 383 Jmol OpenAstexViewer
bMG5 485 - 610 4RTD A 485 - 610 Jmol OpenAstexViewer
4ZIQ A 485 - 610 Jmol OpenAstexViewer
5A42 A 485 - 610 Jmol OpenAstexViewer
bMG6 616 - 741 4RTD A 616 - 741 Jmol OpenAstexViewer
4ZIQ A 616 - 741 Jmol OpenAstexViewer
5A42 A 616 - 741 Jmol OpenAstexViewer
MG2 387 - 479 4RTD A 387 - 479 Jmol OpenAstexViewer
4ZIQ A 387 - 479 Jmol OpenAstexViewer
5A42 A 387 - 479 Jmol OpenAstexViewer
TED_complement 1165 - 1314 4RTD A 1165 - 1314 Jmol OpenAstexViewer
4ZIQ A 1165 - 1314 Jmol OpenAstexViewer
4ZIU A 1165 - 1314 Jmol OpenAstexViewer
5A42 A 1165 - 1314 Jmol OpenAstexViewer