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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: PDP_GEOSE (P77836)

Summary

This is the summary of UniProt entry PDP_GEOSE (P77836).

Description: Pyrimidine-nucleoside phosphorylase {ECO:0000303|PubMed:8782414}
Source organism: Geobacillus stearothermophilus (Bacillus stearothermophilus) (NCBI taxonomy ID )
Length: 433 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Glycos_trans_3N 4 66
Pfam Glycos_transf_3 75 306
Pfam PYNP_C 345 418

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P77836. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRMVDLIEKK RDGHALTKEE IQFIIEGYTK GDIPDYQMSA LAMAIFFRGM
50
51
NEEETAELTM AMVHSGDTID LSRIEGIKVD KHSTGGVGDT TTLVLGPLVA
100
101
SVGVPVAKMS GRGLGHTGGT IDKLESVPGF HVEITNDEFI DLVNKNKIAV
150
151
VGQSGNLTPA DKKLYALRDV TATVNSIPLI ASSIMSKKIA AGADAIVLDV
200
201
KTGVGAFMKD LNDAKALAKA MVDIGNRVGR KTMAIISDMS QPLGYAIGNA
250
251
LEVKEAIDTL KGEGPEDFQE LCLVLGSHMV YLAEKASSLE EARHMLEKAM
300
301
KDGSALQTFK TFLAAQGGDA SVVDDPSKLP QAKYIIELEA KEDGYVSEIV
350
351
ADAVGTAAMW LGAGRATKES TIDLAVGLVL RKKVGDAVKK GESLVTIYSN
400
401
REQVDDVKQK LYENIRISAT PVQAPTLIYD KIS                  
433
 

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Checksums:
CRC64:75EF04B8E7B2E0AD
MD5:b1e4812d8920afa5696f8e511ec635c3

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Glycos_trans_3N 4 - 66 1BRW A 4 - 66 Jmol OpenAstexViewer
B 1004 - 1066 Jmol OpenAstexViewer
Glycos_transf_3 75 - 306 1BRW A 75 - 306 Jmol OpenAstexViewer
B 1075 - 1306 Jmol OpenAstexViewer
PYNP_C 345 - 418 1BRW A 345 - 418 Jmol OpenAstexViewer
B 1345 - 1418 Jmol OpenAstexViewer