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14  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CTG1B_HUMAN (P78358)

Summary

This is the summary of UniProt entry CTG1B_HUMAN (P78358).

Description: Cancer/testis antigen 1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 180 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 1 66
low_complexity n/a 5 71
Pfam Pcc1 89 164
disorder n/a 103 111
low_complexity n/a 144 159
transmembrane n/a 153 172

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P78358. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQAEGRGTGG STGDADGPGG PGIPDGPGGN AGGPGEAGAT GGRGPRGAGA
50
51
ARASGPGGGA PRGPHGGAAS GLNGCCRCGA RGPESRLLEF YLAMPFATPM
100
101
EAELARRSLA QDAPPLPVPG VLLKEFTVSG NILTIRLTAA DHRQLQLSIS
150
151
SCLQQLSLLM WITQCFLPVF LAQPPSGQRR                      
180
 

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Checksums:
CRC64:B122C5C2C8BE1569
MD5:469875d22a564fef46d892cc4f2798dc

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Pcc1 157 - 164 1S9W C 1 - 8 Show 3D Structure View in InterPro
2BNQ C 1 - 8 Show 3D Structure View in InterPro
2BNR C 1 - 8 Show 3D Structure View in InterPro
2F53 C 1 - 8 Show 3D Structure View in InterPro
2F54 C 1 - 8 Show 3D Structure View in InterPro
H 1 - 8 Show 3D Structure View in InterPro
2P5E C 1 - 8 Show 3D Structure View in InterPro
2P5W C 1 - 8 Show 3D Structure View in InterPro
2PYE C 1 - 8 Show 3D Structure View in InterPro
3GJF C 1 - 8 Show 3D Structure View in InterPro
F 1 - 8 Show 3D Structure View in InterPro
3HAE C 1 - 8 Show 3D Structure View in InterPro
F 1 - 8 Show 3D Structure View in InterPro
M 1 - 8 Show 3D Structure View in InterPro
R 1 - 8 Show 3D Structure View in InterPro
3KLA C 1 - 8 Show 3D Structure View in InterPro
F 1 - 8 Show 3D Structure View in InterPro
6RP9 C 1 - 8 Show 3D Structure View in InterPro
H 1 - 8 Show 3D Structure View in InterPro
6RPA C 1 - 8 Show 3D Structure View in InterPro
6RPB C 1 - 8 Show 3D Structure View in InterPro
H 1 - 8 Show 3D Structure View in InterPro
M 1 - 8 Show 3D Structure View in InterPro
R 1 - 8 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;