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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SODC_SCHMA (Q01137)

Summary

This is the summary of UniProt entry SODC_SCHMA (Q01137).

Description: Superoxide dismutase [Cu-Zn] EC=1.15.1.1
Source organism: Schistosoma mansoni (Blood fluke) (NCBI taxonomy ID )
View Pfam proteome data.
Length: 153 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Sod_Cu 7 148

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q01137. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKAVCVMTGT AGVKGVVKFT QETDNGPVHV HAEFSGLKAG KHGFHVHEFG
50
51
DTTNGCTSAG AHFNPTKQEH GAPEDSIRHV GDLGNVVAGA DGNAVYNATD
100
101
KLISLNGSHS IIGRTMVIHE NEDDLGRGGH ELSKVTGNAG GRLACGVIGL
150
151
AAE                                                   
153
 

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Checksums:
CRC64:D30014FDBD34593A
MD5:f8e19837f1c30ab1bf0f8f2dd0ee7517

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Sod_Cu 7 - 148 1TO4 A 7 - 148 Jmol OpenAstexViewer
B 7 - 148 Jmol OpenAstexViewer
C 7 - 148 Jmol OpenAstexViewer
D 7 - 148 Jmol OpenAstexViewer
1TO5 A 7 - 148 Jmol OpenAstexViewer
B 7 - 148 Jmol OpenAstexViewer
C 7 - 148 Jmol OpenAstexViewer
D 7 - 148 Jmol OpenAstexViewer