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17  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CEF1_YEAST (Q03654)

Summary

This is the summary of UniProt entry CEF1_YEAST (Q03654).

Description: Pre-mRNA-splicing factor CEF1
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
Length: 590 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Myb_DNA-binding 10 56
Pfam Myb_DNA-binding 63 106
disorder n/a 116 159
disorder n/a 162 188
coiled_coil n/a 168 188
disorder n/a 193 199
disorder n/a 212 215
disorder n/a 222 235
disorder n/a 238 286
low_complexity n/a 256 274
disorder n/a 292 299
disorder n/a 308 313
disorder n/a 315 320
Pfam Myb_Cef 320 465
disorder n/a 322 355
disorder n/a 380 386
low_complexity n/a 386 405
coiled_coil n/a 388 408
disorder n/a 393 422
disorder n/a 445 446
disorder n/a 471 476
disorder n/a 480 483
disorder n/a 489 490
disorder n/a 492 497
disorder n/a 526 529
disorder n/a 531 532
disorder n/a 577 578

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q03654. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPPVPIYVKG GVWTNVEDQI LKAAVQKYGT HQWSKVASLL QKKTARQSEL
50
51
RWNEYLNPKL NFTEFSKEED AQLLDLAREL PNQWRTIADM MARPAQVCVE
100
101
RYNRLLESED SGGAALSTGV TDLKAGDINP NAETQMARPD NGDLEDEEKE
150
151
MLAEARARLL NTQGKKATRK IRERMLEESK RIAELQKRRE LKQAGINVAI
200
201
KKPKKKYGTD IDYNEDIVYE QAPMPGIYDT STEDRQIKKK FEQFERKVNR
250
251
KGLDGNKDKP SKKNKDKKRK HDENEHVEKA ALGESTTLTD EYKKPKLILS
300
301
APGTKQGKVT YKKKLESKRQ KLIEAQATGT VLTPKELLPH DSGQEDNERS
350
351
NIKSGKQLKS RIRKFLVQMF ASLPSPKNDF EIVLSEDEKE EDAEIAEYEK
400
401
EFENERAMNE EDNFIEPPSQ NDAPRVSLVA VPLAYSTLPI PEFKNNPQSA
450
451
IDNKYNLLVA NAINKEPHMV PEDTVDFLKE VESRMQHITQ GRTSMKIQFK
500
501
TAMPPTEVLL ESIQSKVESI EQLQRKLQHV QPLEQQNNEM CSTLCHHSLP
550
551
ALIEGQRKYY ADYYAYRQEI RSLEGRRKRL QAMLNSSSSI           
590
 

Show the unformatted sequence.

Checksums:
CRC64:A4C417A8B330EA9C
MD5:b646832b1f7dbe8489a98878b22dfbf6

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Myb_Cef 332 - 465 5GM6 c 332 - 465 Show 3D Structure View in InterPro
5GMK c 332 - 465 Show 3D Structure View in InterPro
5WSG c 332 - 465 Show 3D Structure View in InterPro
5Y88 J 332 - 465 Show 3D Structure View in InterPro
5YLZ J 332 - 465 Show 3D Structure View in InterPro
6J6G c 332 - 465 Show 3D Structure View in InterPro
6J6H c 332 - 465 Show 3D Structure View in InterPro
6J6N c 332 - 465 Show 3D Structure View in InterPro
6J6Q c 332 - 465 Show 3D Structure View in InterPro
7DCO L 332 - 465 Show 3D Structure View in InterPro
Myb_DNA-binding 10 - 56 5GM6 c 10 - 56 Show 3D Structure View in InterPro
5GMK c 10 - 56 Show 3D Structure View in InterPro
5MPS O 10 - 56 Show 3D Structure View in InterPro
5MQ0 O 10 - 56 Show 3D Structure View in InterPro
5WSG c 10 - 56 Show 3D Structure View in InterPro
5Y88 J 10 - 56 Show 3D Structure View in InterPro
5YLZ J 10 - 56 Show 3D Structure View in InterPro
6BK8 S 10 - 56 Show 3D Structure View in InterPro
6EXN O 10 - 56 Show 3D Structure View in InterPro
6J6G c 10 - 56 Show 3D Structure View in InterPro
6J6H c 10 - 56 Show 3D Structure View in InterPro
6J6N c 10 - 56 Show 3D Structure View in InterPro
6J6Q c 10 - 56 Show 3D Structure View in InterPro
7DCO L 10 - 56 Show 3D Structure View in InterPro
12 - 56 5LJ3 O 12 - 56 Show 3D Structure View in InterPro
5LJ5 O 12 - 56 Show 3D Structure View in InterPro
5LQW W 12 - 56 Show 3D Structure View in InterPro
63 - 105 5LJ3 O 63 - 105 Show 3D Structure View in InterPro
5LJ5 O 63 - 105 Show 3D Structure View in InterPro
63 - 106 5GM6 c 63 - 106 Show 3D Structure View in InterPro
5GMK c 63 - 106 Show 3D Structure View in InterPro
5LQW W 63 - 106 Show 3D Structure View in InterPro
5MPS O 63 - 106 Show 3D Structure View in InterPro
5MQ0 O 63 - 106 Show 3D Structure View in InterPro
5WSG c 63 - 106 Show 3D Structure View in InterPro
5Y88 J 63 - 106 Show 3D Structure View in InterPro
5YLZ J 63 - 106 Show 3D Structure View in InterPro
6BK8 S 63 - 106 Show 3D Structure View in InterPro
6EXN O 63 - 106 Show 3D Structure View in InterPro
6J6G c 63 - 106 Show 3D Structure View in InterPro
6J6H c 63 - 106 Show 3D Structure View in InterPro
6J6N c 63 - 106 Show 3D Structure View in InterPro
6J6Q c 63 - 106 Show 3D Structure View in InterPro
7DCO L 63 - 106 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;