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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBA50_YEAST (Q04418)

Summary

This is the summary of UniProt entry RBA50_YEAST (Q04418).

Description: RNA polymerase II-associated protein RBA50
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
Length: 439 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 33
disorder n/a 47 93
Pfam RPAP1_N 79 124
disorder n/a 98 103
low_complexity n/a 111 122
disorder n/a 119 120
disorder n/a 127 132
disorder n/a 134 139
disorder n/a 147 152
low_complexity n/a 153 167
disorder n/a 154 156
disorder n/a 177 201
low_complexity n/a 182 195
disorder n/a 239 244
disorder n/a 269 270
Pfam RPAP1_C 289 357
disorder n/a 309 311

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q04418. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDLLGDIVEK DTSDSVESND NGTLSTNNCG TGFPELYKPK KISSWKERLR
50
51
EKRAQKKKTS GKDAEKQQTS TDAPLSEAKS IHNENIKVLQ GMSDEQIVQE
100
101
REDLYNSLDP KLIAKLLKNI NKRAKDENNT PLFAEIEGAS GTWVGGNKQG
150
151
IYDLPPLDDE DVDVALEIRP MLGKDAKHVQ FEEAGKEKDV EEEAKTNDDV
200
201
DDIAPLDFQM AQCIDHMKNE ELFKDVHFIK EESQNEINLE KLDINDPNFN
250
251
DKLHEKYFPD LPKEVDKLKW MQPVQQKTDK NYIIEDVSEC RFDFNGDLVP
300
301
PTRQIDSTIH SGLHHHSDSP ELAGYTIVEL EHLARSTFPS QRCIAIQTLG
350
351
RILYKLGQKS YYQLVPEIDA DTYKEDGSIS NVMDKIYSMF WDLIKDGKVI
400
401
ESLEISSDEK FTRNLSVRNY AIDALWLWKQ GGGDFRTKK            
439
 

Show the unformatted sequence.

Checksums:
CRC64:1880B5F6CE81BEC1
MD5:72beadf999368786ab0102086e2da702

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;