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17  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL18_HUMAN (Q07020)

Summary

This is the summary of UniProt entry RL18_HUMAN (Q07020).

Description: 60S ribosomal protein L18
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 188 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Ribosomal_L18 2 188
disorder n/a 3 13
disorder n/a 15 16
disorder n/a 63 69
disorder n/a 139 140
disorder n/a 148 188

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q07020. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGVDIRHNKD RKVRRKEPKS QDIYLRLLVK LYRFLARRTN STFNQVVLKR
50
51
LFMSRTNRPP LSLSRMIRKM KLPGRENKTA VVVGTITDDV RVQEVPKLKV
100
101
CALRVTSRAR SRILRAGGKI LTFDQLALDS PKGCGTVLLS GPRKGREVYR
150
151
HFGKAPGTPH SHTKPYVRSK GRKFERARGR RASRGYKN             
188
 

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Checksums:
CRC64:C4E416E7A5329B7C
MD5:da1b07e4f2e14f34f723e7c4e873e12f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L18 2 - 188 4UG0 LQ 2 - 188 Jmol OpenAstexViewer
4V6X CQ 2 - 188 Jmol OpenAstexViewer
5AJ0 AQ 2 - 188 Jmol OpenAstexViewer
5LKS LQ 2 - 188 Jmol OpenAstexViewer
5T2C K 2 - 188 Jmol OpenAstexViewer
6EK0 LQ 2 - 188 Jmol OpenAstexViewer
6IP5 2K 2 - 188 Jmol OpenAstexViewer
6IP6 2K 2 - 188 Jmol OpenAstexViewer
6IP8 2K 2 - 188 Jmol OpenAstexViewer
6OLE R 2 - 188 Jmol OpenAstexViewer
6OLF R 2 - 188 Jmol OpenAstexViewer
6OLG AQ 2 - 188 Jmol OpenAstexViewer
6OLI R 2 - 188 Jmol OpenAstexViewer
6OLZ AQ 2 - 188 Jmol OpenAstexViewer
6OM0 R 2 - 188 Jmol OpenAstexViewer
6OM7 R 2 - 188 Jmol OpenAstexViewer
6QZP LQ 2 - 188 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.