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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PHYA_ORYSJ (Q10DU0)

Summary

This is the summary of UniProt entry PHYA_ORYSJ (Q10DU0).

Description: Phytochrome A
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 1128 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 18
low_complexity n/a 2 21
disorder n/a 20 22
disorder n/a 49 50
disorder n/a 52 59
disorder n/a 62 63
Pfam PAS_2 70 186
disorder n/a 110 113
Pfam GAF 219 404
low_complexity n/a 342 353
disorder n/a 350 358
Pfam PHY 415 594
disorder n/a 536 548
Pfam PAS 622 737
low_complexity n/a 690 700
disorder n/a 697 700
Pfam PAS 752 877
Pfam HisKA 898 959
Pfam HATPase_c 1011 1124
disorder n/a 1076 1077
disorder n/a 1084 1085

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q10DU0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSSSRPTQCS SSSSRTRQSS RARILAQTTL DAELNAEYEE YGDSFDYSKL
50
51
VEAQRTTGPE QQARSEKVIA YLHHIQRAKL IQPFGCLLAL DEKTFNVIAL
100
101
SENAPEMLTT VSHAVPSVDD PPKLRIGTNV WSLFTDPGAT ALQKALGFAD
150
151
VSLLNPILVQ CKTSGKPFYA IVHRATGCLV VDFEPVKPTE FPATAAGALQ
200
201
SYKLAAKAIS KIQSLPGGSM EVLCNTVVKE LFDLTGYDRV MAYKFHEDDH
250
251
GEVFAEITKP GLEPYLGLHY PATDIPQAAR FLFMKNKVRM ICDCRARSIK
300
301
IIEDESLHLD ISLCGSTLRA PHSCHLQYME NMNSIASLVM AVVVNENEDD
350
351
DEVGADQPAQ QQKRKKLWGL LVCHHESPRY VPFPLRYACE FLAQVFAVHV
400
401
NKEFELERQV REKSILRMQT MLSDMLLRES SPLSIVSGTP NIMDLVKCDG
450
451
AALLYGGKVW RLQNAPTESQ IRDIAFWLSD VHRDSTGLST DSLHDAGYPG
500
501
AAALGDMICG MAVAKINSKD ILFWFRSHTA AEIRWGGAKH DPSDKDDSRR
550
551
MHPRLSFKAF LEVVKMKSLP WNDYEMDAIH SLQLILRGTL NDDIKPTRAA
600
601
SLDNQVGDLK LDGLAELQAV TSEMVRLMET ATVPILAVDS NGLVNGWNQK
650
651
VAELTGLRVD EAIGRHILTV VEESSVPVVQ RMLYLALQGK EEKEVKFEVK
700
701
THGSKRDDGP VILVVNACAS RDLHDHVVGV CFVAQDMTVH KLVMDKFTRV
750
751
EGDYKAIIHN PSPLIPPIFG ADEFGWCSEW NAAMTKLTGW HRDEVINKML
800
801
LGEVFDSTNA SCLVKNKDAF VSLCILINSA LAGDETEKAP FSFFDRNGKY
850
851
IECLLSVNRK VNADGVITGV FCFIQVPSHE LQHALHVQQA SQQNALTKLK
900
901
AYSYMRHAIN NPLSGMLYSR KALKNTGLNE EQMKEVNVAD SCHRQLNKIL
950
951
SDLDQDSVMN KSSCLDLEMV EFVLQDVFVA AVSQVLITCQ GKGIRVSCNL
1000
1001
PERYMKQTVY GDGVRLQQIL SDFLFVSVKF SPVGGSVEIS CSLTKNSIGE
1050
1051
NLHLIDLELR IKHQGKGVPA DLLSQMYEDD NKEQSDEGMS LAVSRNLLRL
1100
1101
MNGDVRHMRE AGMSTFILSV ELASAPAK                        
1128
 

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Checksums:
CRC64:7DB1823EE704E464
MD5:9bc7293d244dfb3c3b9d9d9f2b0a3e38

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;