Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q10JZ3_ORYSJ (Q10JZ3)

Summary

This is the summary of UniProt entry Q10JZ3_ORYSJ (Q10JZ3).

Description: DNA-directed RNA polymerase subunit beta {ECO:0000256|RuleBase:RU363031}
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 1155 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 17
Pfam RNA_pol_Rpb2_1 49 421
Pfam RNA_pol_Rpb2_2 192 371
Pfam RNA_pol_Rpb2_3 446 510
disorder n/a 470 475
Pfam RNA_pol_Rpb2_4 547 608
Pfam RNA_pol_Rpb2_5 629 674
Pfam RNA_pol_Rpb2_6 681 1059
disorder n/a 801 802
disorder n/a 843 858
disorder n/a 907 911
disorder n/a 1046 1053
disorder n/a 1059 1061
Pfam RNA_pol_Rpb2_7 1061 1153

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q10JZ3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MERTEEEEAP AAKDPNASLP SPTYRSLAAP VTKPVDKFAL LPAFLKVRGL
50
51
VKEHIDSFNY FITKGIRNIV KANNRIEARN NPSIFLRYNS VRVGVPSVQV
100
101
QYIAEKITPH FCRLTDRTYS APVLADIEYT VGKQYELKRK PNFIIGYLPI
150
151
MLRSHACVLN GKDEAELARY GECPLDPGGY FIVKGTEKVI LIQEQLSKNR
200
201
IIIDTDSKGR VIASVTSSTH EIKSKTVIFM EKEKIYLQLN QFTKPIPIIV
250
251
VMKAMGMESD QEVAQMVGRD PRYGDLLYPS IQECAFERIY TQKQALQYMD
300
301
DKVMYPGAGN QKEGRSKSIL RDVFVAHVPV ESGNFRPKCI YTAVMLRRMM
350
351
DAILNADTFD DKDYVGNKRL ELSGQLISLL FEDLFKTMNS NAVELMNKTS
400
401
EKIHSSPLDL SLHIKENIIT HGLERAISTG NWDIKRFRMH RKGVSQVLSR
450
451
LSYMASLGYM TRITPQFEKT RKTSGPRALQ PSQWGMLCPC DTPEGEACGL
500
501
TKNLALLTHV TTDQEEGPLM NLCYSLGVED LSLLSGEEIH ASGSFLVMFN
550
551
GLILGKHRQP QRFANAMRKL RRSGIIGEFV SIFVNEKQHC IHIASDGGRV
600
601
CRPLIIADKG IPRVKEHHMK QLRDGIRSFD DFLRDGLIEY LDVNEENNAL
650
651
IALYEHEDQD DVQRSSITHI EIEPLTILGV VAGLIPYPHH NQSPRNTYQC
700
701
AMGKQAMGNI AYNQLFRADS LLYLLVYAQR PLLTTKTIEL VGYDKLGAGQ
750
751
NATVAVMSYS GYDIEDAIVM NKSSLDRGFG RCIAMKKYTV TKEKYEGGYS
800
801
DRIVKPQRDK DGALLKQNMR ALDEDGFAAP GLIIRNHDIY VNKQTPRNTK
850
851
RDSGAHLTDR DYKDSPAVYK GVDGETTVVD RVMLCSDTDE KLIIKCIIRH
900
901
TRRPEVGDKF SSRHGQKGVC GTIVQQEDFP FSERGICPDL IMNPHGFPSR
950
951
MTIGKMIELL GGKAGVSCGQ FHYGSAFGEP SGNADKVEDI SRTLVKHGFS
1000
1001
YNGKDLLYSG ILGHPCQAYV FMGPIYYQKL KHMVLDKMHA RASGPRVLLT
1050
1051
RQPTEGRSRD GGLRLGEMER DCLIAYGASM LIFERLLISS DPYQVQVCRK
1100
1101
CGLLGYYNHK LKASYCSMCK NGENMAKMRM PYACKLLFQE LQAMNVVPRL
1150
1151
KLTEG                                                 
1155
 

Show the unformatted sequence.

Checksums:
CRC64:0295B78424E8BDF5
MD5:f20ff7d51a7dbdfe6adb2c735736b34c

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;