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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RM23_HUMAN (Q16540)

Summary

This is the summary of UniProt entry RM23_HUMAN (Q16540).

Description: 39S ribosomal protein L23, mitochondrial
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 153 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Ribosomal_L23 28 107
disorder n/a 71 84
disorder n/a 108 114
disorder n/a 116 118
disorder n/a 121 148

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q16540. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARNVVYPLY RLGGPQLRVF RTNFFIQLVR PGVAQPEDTV QFRIPMEMTR
50
51
VDLRNYLEGI YNVPVAAVRT RVQHGSNKRR DHRNVRIKKP DYKVAYVQLA
100
101
HGQTFTFPDL FPEKDESPEG SAADDLYSML EEERQQRQSS DPRRGGVPSW
150
151
FGL                                                   
153
 

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Checksums:
CRC64:7277C03CA224ED50
MD5:bffd7dede78d9281fb3bfba4321ed623

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L23 28 - 107 3J7Y U 28 - 107 Jmol OpenAstexViewer
3J9M U 28 - 107 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.