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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPOC_STAA8 (Q2G0N5)

Summary

This is the summary of UniProt entry RPOC_STAA8 (Q2G0N5).

Description: DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47) (NCBI taxonomy ID 93061)
Length: 1207 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 4 331
low_complexity n/a 173 196
coiled_coil n/a 181 201
low_complexity n/a 259 272
disorder n/a 299 319
Pfam RNA_pol_Rpb1_2 333 392
Pfam RNA_pol_Rpb1_2 375 475
coiled_coil n/a 376 403
Pfam RNA_pol_Rpb1_3 478 667
disorder n/a 544 545
disorder n/a 581 582
disorder n/a 588 593
Pfam RNA_pol_Rpb1_4 696 773
Pfam RNA_pol_Rpb1_5 774 1135
disorder n/a 851 852
disorder n/a 858 859
disorder n/a 863 864
disorder n/a 930 931
disorder n/a 934 945
disorder n/a 1111 1112
disorder n/a 1195 1207

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q2G0N5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MIDVNNFHYM KIGLASPEKI RSWSFGEVKK PETINYRTLK PEKDGLFCER
50
51
IFGPTKDWEC SCGKYKRVRY KGMVCDRCGV EVTKSKVRRE RMGHIELAAP
100
101
VSHIWYFKGI PSRMGLLLDM SPRALEEVIY FASYVVVDPG PTGLEKKTLL
150
151
SEAEFRDYYD KYPGQFVAKM GAEGIKDLLE EIDLDEELKL LRDELESATG
200
201
QRLTRAIKRL EVVESFRNSG NKPSWMILDV LPIIPPEIRP MVQLDGGRFA
250
251
TSDLNDLYRR VINRNNRLKR LLDLGAPGII VQNEKRMLQE AVDALIDNGR
300
301
RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIAVGPSL
350
351
KMYQCGLPKE MALELFKPFV MKELVQREIA TNIKNAKSKI ERMDDEVWDV
400
401
LEEVIREHPV LLNRAPTLHR LGIQAFEPTL VEGRAIRLHP LVTTAYNADF
450
451
DGDQMAVHVP LSKEAQAEAR MLMLAAQNIL NPKDGKPVVT PSQDMVLGNY
500
501
YLTLERKDAV NTGAIFNNTN EVLKAYANGF VHLHTRIGVH ASSFNNPTFT
550
551
EEQNKKILAT SVGKIIFNEI IPDSFAYINE PTQENLERKT PNRYFIDPTT
600
601
LGEGGLKEYF ENEELIEPFN KKFLGNIIAE VFNRFSITDT SMMLDRMKDL
650
651
GFKFSSKAGI TVGVADIVVL PDKQQILDEH EKLVDRITKQ FNRGLITEEE
700
701
RYNAVVEIWT DAKDQIQGEL MQSLDKTNPI FMMSDSGARG NASNFTQLAG
750
751
MRGLMAAPSG KIIELPITSS FREGLTVLEY FISTHGARKG LADTALKTAD
800
801
SGYLTRRLVD VAQDVIVREE DCGTDRGLLV SDIKEGTEMI EPFIERIEGR
850
851
YSKETIRHPE TDEIIIRPDE LITPEIAKKI TDAGIEQMYI RSAFTCNARH
900
901
GVCEKCYGKN LATGEKVEVG EAVGTIAAQS IGEPGTQLTM RTFHTGGVAG
950
951
SDITQGLPRI QEIFEARNPK GQAVITEIEG VVEDIKLAKD RQQEIVVKGA
1000
1001
NETRSYLASG TSRIIVEIGQ PVQRGEVLTE GSIEPKNYLS VAGLNATESY
1050
1051
LLKEVQKVYR MQGVEIDDKH VEVMVRQMLR KVRIIEAGDT KLLPGSLVDI
1100
1101
HNFTDANREA FKHRKRPATA KPVLLGITKA SLETESFLSA ASFQETTRVL
1150
1151
TDAAIKGKRD DLLGLKENVI IGKLIPAGTG MRRYSDVKYE KTAKPVAEVE
1200
1201
SQTEVTE                                               
1207
 

Show the unformatted sequence.

Checksums:
CRC64:8E87587E6C454003
MD5:4b9a7ef12586ba36cfa5abd3db89975a

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;