Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: GM4D_PSEAE (Q51366)

Summary

This is the summary of UniProt entry GM4D_PSEAE (Q51366).

Description: GDP-mannose 4,6-dehydratase {ECO:0000255|HAMAP-Rule:MF_00955}
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (NCBI taxonomy ID 208964)
Length: 323 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam GDP_Man_Dehyd 6 312
low_complexity n/a 94 108

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q51366. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTRSALVTGI TGQDGAYLAK LLLEKGYRVH GLVARRSSDT RWRLRELGIE
50
51
GDIQYEDGDM ADACSVQRAV IKAQPQEVYN LAAQSFVGAS WNQPVTTGVV
100
101
DGLGVTHLLE AIRQFSPETR FYQASTSEMF GLIQAERQDE NTPFYPRSPY
150
151
GVAKLYGHWI TVNYRESFGL HASSGILFNH ESPLRGIEFV TRKVTDAVAR
200
201
IKLGKQQELR LGNVDAKRDW GFAGDYVEAM WLMLQQDKAD DYVVATGVTT
250
251
TVRDMCQIAF EHVGLDYRDF LKIDPAFFRP AEVDVLLGNP AKAQRVLGWK
300
301
PRTSLDELIR MMVEADLRRV SRE                             
323
 

Show the unformatted sequence.

Checksums:
CRC64:6C2BCC27D00D97E0
MD5:85d010fb479e34b496b58f4759483e47

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
GDP_Man_Dehyd 6 - 312 1RPN A 6 - 312 Jmol OpenAstexViewer
B 6 - 312 Jmol OpenAstexViewer
C 6 - 312 Jmol OpenAstexViewer
D 6 - 312 Jmol OpenAstexViewer