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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q5L7T7_BACFN (Q5L7T7)

Summary

This is the summary of UniProt entry Q5L7T7_BACFN (Q5L7T7).

Description: Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}
Source organism: Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) (NCBI taxonomy ID 272559)
View Pfam proteome data.
Length: 496 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 24
Pfam He_PIG_assoc 36 64
Pfam Melibiase_2 122 409
Pfam Melibiase_C 421 495

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5L7T7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKITSYVSFL YCLCLMLASP TVQASEVRTA IFEGKPCINP PHVVGNYPAT
50
51
PFLFYIPTSG ERPIKWHAEN LPKGLKLDKE TGIIKGKVVE KGTYKVMLKA
100
101
ENALGTDTQE LLINIGDELL LTPPMGWNSW NTFGRHLTEE LLLQTADAMV
150
151
ENGMRDLGYA YINIDDFWQL PERGADGHIQ IDKTKFPRGI KYVADYLHER
200
201
GFKLGIYSDA ADKTCGGVCG SYGYEEIDAR DFASWGVDLL KYDYCNAPAG
250
251
RVEAMERYEK MGRALRATDR SIVFSICEWG QREPWKWAKK VGGHLWRVSG
300
301
DIGDLWNRST DEKGGLRGIL NILEINAPLS EYARPGGWND PDMLVVGIGG
350
351
KSKSIGYESE GCTNEQYQSH FALWCMMASP LLCGNDVRQM NDSTLQILLN
400
401
KDLIAINQDP LGIQAERAIR ADHYDVWVKP LSDGSKAIAC LNRISGPVDV
450
451
ELNVKTVEGL SLDRVYDVIE GSLVAEASTG WVVKLAPGEC KVFICK    
496
 

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Checksums:
CRC64:EFCAD9802F91EA32
MD5:2156ed3e6544cc59c67984f5c992669c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
He_PIG_assoc 36 - 64 4OGZ A 36 - 64 Jmol OpenAstexViewer
B 36 - 64 Jmol OpenAstexViewer
Melibiase_2 122 - 409 4OGZ A 122 - 409 Jmol OpenAstexViewer
B 122 - 409 Jmol OpenAstexViewer
Melibiase_C 421 - 495 4OGZ A 421 - 495 Jmol OpenAstexViewer
B 421 - 495 Jmol OpenAstexViewer