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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q5NV88_HUMAN (Q5NV88)

Summary

This is the summary of UniProt entry Q5NV88_HUMAN (Q5NV88).

Description: V1-22 protein {ECO:0000313|EMBL:BAA19991.1} (Fragment)
Source organism: Homo sapiens (Human) (NCBI taxonomy ID )
View Pfam proteome data.
Length: 98 amino acids
Reference Proteome: x

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam V-set 5 98

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5NV88. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
NFMLTQPHSV SESPGKTVTI SCTRSSGSIA SNYVQWYQQR PGSSPTTVIY
50
51
EDNQRPSGVP DRFSGSIDSS SNSASLTISG LKTEDEADYY CQSYDSSN  
98
 

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Checksums:
CRC64:B083D51554633ABC
MD5:c7c1bada076517b90b2343fb77ccd07c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
V-set 5 - 98 2MKW A 5 - 98 Jmol OpenAstexViewer
2MMX A 5 - 98 Jmol OpenAstexViewer
2W0K A 5 - 98 Jmol OpenAstexViewer
B 5 - 98 Jmol OpenAstexViewer
2W0L A 5 - 95 Jmol OpenAstexViewer
B 5 - 95 Jmol OpenAstexViewer
C 5 - 95 Jmol OpenAstexViewer
D 5 - 95 Jmol OpenAstexViewer