Summary
This is the summary of UniProt entry FA83B_HUMAN (Q5T0W9).
Description: | Protein FAM83B {ECO:0000305} |
Source organism: |
Homo sapiens (Human)
(NCBI taxonomy ID
9606)
|
Length: | 1011 amino acids |
Reference Proteome: |
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Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
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Source | Domain | Start | End |
---|---|---|---|
Pfam | FAM83 | 12 | 282 |
disorder | n/a | 79 | 80 |
low_complexity | n/a | 308 | 317 |
disorder | n/a | 358 | 359 |
disorder | n/a | 362 | 363 |
disorder | n/a | 366 | 389 |
low_complexity | n/a | 399 | 410 |
disorder | n/a | 400 | 404 |
disorder | n/a | 408 | 465 |
disorder | n/a | 467 | 483 |
disorder | n/a | 487 | 488 |
disorder | n/a | 501 | 534 |
disorder | n/a | 542 | 796 |
low_complexity | n/a | 556 | 573 |
disorder | n/a | 800 | 929 |
low_complexity | n/a | 825 | 844 |
low_complexity | n/a | 906 | 925 |
disorder | n/a | 944 | 974 |
disorder | n/a | 982 | 984 |
disorder | n/a | 1000 | 1001 |
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q5T0W9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
Sequence: | 1
METSSMLSSL NDECKSDNYI EPHYKEWYRV AIDILIEHGL EAYQEFLVQE
50 51
RVSDFLAEEE INYILKNVQK VAQSTAHGTD DSCDDTLSSG TYWPVESDVE
100 101
APNLDLGWPY VMPGLLGGTH IDLLFHPPRA HLLTIKETIR KMIKEARKVI
150 151
ALVMDIFTDV DIFKEIVEAS TRGVSVYILL DESNFNHFLN MTEKQGCSVQ
200 201
RLRNIRVRTV KGQDYLSKTG AKFHGKMEQK FLLVDCQKVM YGSYSYMWSF
250 251
EKAHLSMVQI ITGQLVESFD EEFRTLYARS CVPSSFAQEE SARVKHGKAL
300 301
WENGTYQHSV SSLASVSSQR NLFGRQDKIH KLDSSYFKNR GIYTLNEHDK
350 351
YNIRSHGYKP HFVPNFNGPN AIRQFQPNQI NENWKRHSYA GEQPETVPYL
400 401
LLNRALNRTN NPPGNWKKPS DSLSVASSSR EGYVSHHNTP AQSFANRLAQ
450 451
RKTTNLADRN SNVRRSFNGT DNHIRFLQQR MPTLEHTTKS FLRNWRIESY
500 501
LNDHSEATPD SNGSALGDRF EGYDNPENLK ANALYTHSRL RSSLVFKPTL
550 551
PEQKEVNSCT TGSSNSTIIG SQGSETPKEV PDTPTNVQHL TDKPLPESIP
600 601
KLPLQSEAPK MHTLQVPENH SVALNQTTNG HTESNNYIYK TLGVNKQTEN
650 651
LKNQQTENLL KRRSFPLFDN SKANLDPGNS KHYVYSTLTR NRVRQPEKPK
700 701
EDLLKSSKSM HNVTHNLEED EEEVTKRNSP SGTTTKSVSI AALLDVNKEE
750 751
SNKELASKKE VKGSPSFLKK GSQKLRSLLS LTPDKKENLS KNKAPAFYRL
800 801
CSSSDTLVSE GEENQKPKKS DTKVDSSPRR KHSSSSNSQG SIHKSKEDVT
850 851
VSPSQEINAP PDENKRTPSP GPVESKFLER AGDASAPRFN TEQIQYRDSR
900 901
EINAVVTPER RPTSSPRPTS SELLRSHSTD RRVYSRFEPF CKIESSIQPT
950 951
SNMPNTSINR PEIKSATMGN SYGRSSPLLN YNTGVYRSYQ PNENKFRGFM
1000 1001
QKFGNFIHKN K
1011
Show the unformatted sequence. |
Checksums: |
CRC64:7EF02DC36F95CFC3
MD5:3cf733ad9a5f7a9a117d2eebb97cf3ed
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
---|---|---|---|---|---|
FAM83 | 117 - 282 | 5QHM | A | 3 - 168 | Jmol OpenAstexViewer |
5QHN | A | 3 - 168 | Jmol OpenAstexViewer | ||
5QHO | A | 3 - 168 | Jmol OpenAstexViewer | ||
5QHP | A | 3 - 168 | Jmol OpenAstexViewer | ||
5QHQ | A | 3 - 168 | Jmol OpenAstexViewer | ||
5QHR | A | 3 - 168 | Jmol OpenAstexViewer | ||
5QHS | A | 3 - 168 | Jmol OpenAstexViewer | ||
118 - 282 | 5LZK | A | 118 - 282 | Jmol OpenAstexViewer | |
B | 118 - 282 | Jmol OpenAstexViewer | |||
5QHI | A | 118 - 282 | Jmol OpenAstexViewer | ||
B | 118 - 282 | Jmol OpenAstexViewer | |||
5QHJ | A | 118 - 282 | Jmol OpenAstexViewer | ||
B | 118 - 282 | Jmol OpenAstexViewer | |||
5QHK | A | 118 - 282 | Jmol OpenAstexViewer | ||
B | 118 - 282 | Jmol OpenAstexViewer | |||
5QHL | A | 118 - 282 | Jmol OpenAstexViewer | ||
B | 118 - 282 | Jmol OpenAstexViewer |
TreeFam
Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.