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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DGOA_ECOLI (Q6BF16)

Summary

This is the summary of UniProt entry DGOA_ECOLI (Q6BF16).

Description: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase EC=4.1.2.21
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 205 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Aldolase 2 194
low_complexity n/a 108 121

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6BF16. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQWQTKLPLI AILRGITPDE ALAHVGAVID AGFDAVEIPL NSPQWEQSIP
50
51
AIVDAYGDKA LIGAGTVLKP EQVDALARMG CQLIVTPNIH SEVIRRAVGY
100
101
GMTVCPGCAT ATEAFTALEA GAQALKIFPS SAFGPQYIKA LKAVLPSDIA
150
151
VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY RAGQSVERTA QQAAAFVKAY
200
201
REAVQ                                                 
205
 

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Checksums:
CRC64:FC59B92BAAA41CE4
MD5:b1699e64fb45a8a9bf64c0c28e9319f2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Aldolase 2 - 194 2V81 A 2 - 194 Jmol OpenAstexViewer
2V82 A 2 - 194 Jmol OpenAstexViewer
5 - 194 4QCC A 5 - 194 Jmol OpenAstexViewer
B 5 - 194 Jmol OpenAstexViewer