Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SOGA3_MOUSE (Q6NZL0)

Summary

This is the summary of UniProt entry SOGA3_MOUSE (Q6NZL0).

Description: Protein SOGA3
Source organism: Mus musculus (Mouse) (NCBI taxonomy ID 10090)
Length: 945 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 253
sig_p n/a 1 21
low_complexity n/a 4 23
low_complexity n/a 72 81
low_complexity n/a 86 101
low_complexity n/a 110 126
low_complexity n/a 158 185
low_complexity n/a 214 229
low_complexity n/a 227 247
disorder n/a 255 256
disorder n/a 259 395
low_complexity n/a 268 275
low_complexity n/a 310 313
low_complexity n/a 324 343
coiled_coil n/a 340 381
low_complexity n/a 342 355
coiled_coil n/a 383 417
disorder n/a 418 420
disorder n/a 422 423
disorder n/a 432 433
coiled_coil n/a 446 497
disorder n/a 450 472
disorder n/a 490 492
disorder n/a 494 525
Pfam SOGA 519 613
coiled_coil n/a 520 554
disorder n/a 541 543
disorder n/a 545 546
disorder n/a 562 587
low_complexity n/a 581 595
coiled_coil n/a 589 623
disorder n/a 617 645
coiled_coil n/a 633 681
Pfam SOGA 639 727
disorder n/a 658 663
disorder n/a 672 708
coiled_coil n/a 691 723
disorder n/a 719 722
disorder n/a 733 819
coiled_coil n/a 813 833
transmembrane n/a 914 944
low_complexity n/a 914 928
low_complexity n/a 935 945

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6NZL0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSQPPSGGAA PAATSASAAA AATEARMHPE GCSRKQQRAQ SPARPRDNSL
50
51
RQTAGATRSP LGVGPKLNSV RQQQLQQQQQ QGNKITGRST SGTGSRGLGG
100
101
GAEKAVPSIP KGAVPGAVQP APGAEGSPAA ILASVSFRRS GQPEEAPREI
150
151
ESGPSKVGEP PPLGGVGGGG EGGGAGGGPG DREGGAPQPP PPRGWRGKGV
200
201
RATQRGSSVA EGVSPSPPTA ATSKTPGPGS RNSGSGSTGS GSGGGGSYWK
250
251
EGCLQSELIQ FHLKKERAAA AAAAAQMHTK NGGGGSRSSP VAGAPAICEP
300
301
LVVPSSSPMA AAAEGPQQSA EGNGSGGAMQ AAAPPSSQPH SQQLQEQEDM
350
351
QEEMEKLREE NETLKNEIDE LRTEMDEMRD TFFEEDACQL QEMRHELERA
400
401
NKNCRILQYR LRKAERKRLR YAQTGEIDGE LLRSLEQDLK VAKDVSVRLH
450
451
HELENVEEKR TTTEDENEKL RQQLIEVEIA KQALQNELEK MKELSLKRRG
500
501
SKDLPKSEKK AQQTPTEDDN EDLKCQLQFV KEEAALMRKK MAKIDKEKDR
550
551
FEHELQKYRS FYGDLDSPLP KGEAGGPPST REAELKLRLR LVEEEANILG
600
601
RKIVELEVEN RGLKAELDDL RGEDFNGSSN PLMREQSESL SELRQHLQLV
650
651
EDETELLRRN VADLEEQNKR ITAELNKYKY KSSGHDSSRH HDNAKTEALQ
700
701
EELKAARLQI NELSGKVMQL QYENRVLMSN MQRYDLASHL GIRGSPRDSD
750
751
AESDAGKKES DDDSRPPHRK REGPIGGESD SEEVRNIRSL TPTRSFYPTP
800
801
GPWPKSFSDR QQMKDIRSEA ERLGKTIDRL IADTSTIITE ARIYVANGDL
850
851
FGLMDEEDDG SRIREHELLY RINAQMKAFR KELQTFIDRL EVPKSADDRG
900
901
AEEPISVSQM FQPIILLILI LVLFSSLSYT TIFKLVFLFT LFFVL     
945
 

Show the unformatted sequence.

Checksums:
CRC64:DBF08203CDAA4182
MD5:14e197fa36a51c18566df7275837b253

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;