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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q8DR52_STRR6 (Q8DR52)

Summary

This is the summary of UniProt entry Q8DR52_STRR6 (Q8DR52).

Description: Choline-binding protein F {ECO:0000313|EMBL:AAK99141.1}
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (NCBI taxonomy ID 171101)
View Pfam proteome data.
Length: 338 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
low_complexity n/a 0 11
sig_p n/a 1 27
low_complexity n/a 9 20
Pfam CW_binding_1 53 69
Pfam CW_binding_1 95 111
disorder n/a 123 124
Pfam CW_binding_1 155 173
Pfam CW_binding_1 208 217
Pfam CW_binding_1 219 237
Pfam CW_binding_1 239 258
Pfam CW_binding_1 260 278
Pfam CW_binding_1 280 299
Pfam CW_binding_1 301 319

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8DR52. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKLLKKMMQV LLAVFFFGLL ATNTVFANTT GGRFVDKDNR KYYVKDDHKA
50
51
IYWHKIDGKT YYFGDIGEMV VGWQYLEIPG TGYRDNLFDN QPVNEIGLQE
100
101
KWYYFGQDGA LLEQTDKQVL EAKTSENTGK VYGEQYPLSA EKRTYYFDNN
150
151
YAVKTGWIYE DGNWYYLNKL GNFGDDSYNP LPIGEVAKGW TQDFHVTIDI
200
201
DRSKPAPWYY LDASGKMLTD WQKVNGKWYY FGSSGSMATG WKYVRGKWYY
250
251
LDNKNGDMKT GWQYLGNKWY YLRSSGAMVT GWYQDGLTWY YLNAGNGDMK
300
301
TGWFQVNGKW YYAYSSGALA VNTTVDGYSV NYNGEWVQ             
338
 

Show the unformatted sequence.

Checksums:
CRC64:F1DFCF08D526F6E0
MD5:182891669a328c9a5af46208bbd8c034

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
CW_binding_1 155 - 173 2V04 A 128 - 146 Jmol OpenAstexViewer
2V05 A 128 - 146 Jmol OpenAstexViewer
2VYU A 128 - 146 Jmol OpenAstexViewer
2X8M A 128 - 146 Jmol OpenAstexViewer
2X8O A 128 - 146 Jmol OpenAstexViewer
2X8P A 128 - 146 Jmol OpenAstexViewer
208 - 217 2V04 A 181 - 190 Jmol OpenAstexViewer
2V05 A 181 - 190 Jmol OpenAstexViewer
2VYU A 181 - 190 Jmol OpenAstexViewer
2X8M A 181 - 190 Jmol OpenAstexViewer
2X8O A 181 - 190 Jmol OpenAstexViewer
2X8P A 181 - 190 Jmol OpenAstexViewer
219 - 237 2V04 A 192 - 210 Jmol OpenAstexViewer
2V05 A 192 - 210 Jmol OpenAstexViewer
2VYU A 192 - 210 Jmol OpenAstexViewer
2X8M A 192 - 210 Jmol OpenAstexViewer
2X8O A 192 - 210 Jmol OpenAstexViewer
2X8P A 192 - 210 Jmol OpenAstexViewer
239 - 258 2V04 A 212 - 231 Jmol OpenAstexViewer
2V05 A 212 - 231 Jmol OpenAstexViewer
2VYU A 212 - 231 Jmol OpenAstexViewer
2X8M A 212 - 231 Jmol OpenAstexViewer
2X8O A 212 - 231 Jmol OpenAstexViewer
2X8P A 212 - 231 Jmol OpenAstexViewer
260 - 278 2V04 A 233 - 251 Jmol OpenAstexViewer
2V05 A 233 - 251 Jmol OpenAstexViewer
2VYU A 233 - 251 Jmol OpenAstexViewer
2X8M A 233 - 251 Jmol OpenAstexViewer
2X8O A 233 - 251 Jmol OpenAstexViewer
2X8P A 233 - 251 Jmol OpenAstexViewer
280 - 299 2V04 A 253 - 272 Jmol OpenAstexViewer
2V05 A 253 - 272 Jmol OpenAstexViewer
2VYU A 253 - 272 Jmol OpenAstexViewer
2X8M A 253 - 272 Jmol OpenAstexViewer
2X8O A 253 - 272 Jmol OpenAstexViewer
2X8P A 253 - 272 Jmol OpenAstexViewer
301 - 319 2V04 A 274 - 292 Jmol OpenAstexViewer
2V05 A 274 - 292 Jmol OpenAstexViewer
2VYU A 274 - 292 Jmol OpenAstexViewer
2X8M A 274 - 292 Jmol OpenAstexViewer
2X8O A 274 - 292 Jmol OpenAstexViewer
2X8P A 274 - 292 Jmol OpenAstexViewer
53 - 69 2V04 A 26 - 42 Jmol OpenAstexViewer
2V05 A 26 - 42 Jmol OpenAstexViewer
2VYU A 26 - 42 Jmol OpenAstexViewer
2X8M A 26 - 42 Jmol OpenAstexViewer
2X8O A 26 - 42 Jmol OpenAstexViewer
2X8P A 26 - 42 Jmol OpenAstexViewer
95 - 111 2V04 A 68 - 84 Jmol OpenAstexViewer
2V05 A 68 - 84 Jmol OpenAstexViewer
2VYU A 68 - 84 Jmol OpenAstexViewer
2X8M A 68 - 84 Jmol OpenAstexViewer
2X8O A 68 - 84 Jmol OpenAstexViewer
2X8P A 68 - 84 Jmol OpenAstexViewer