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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SMRC1_HUMAN (Q92922)

Summary

This is the summary of UniProt entry SMRC1_HUMAN (Q92922).

Description: SWI/SNF complex subunit SMARCC1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 1105 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 1 2
low_complexity n/a 1 19
low_complexity n/a 10 28
Pfam SWIRM-assoc_2 32 445
disorder n/a 42 43
disorder n/a 246 257
disorder n/a 282 284
disorder n/a 287 442
low_complexity n/a 327 336
Pfam SWIRM 452 537
disorder n/a 543 555
disorder n/a 570 571
disorder n/a 580 587
disorder n/a 616 618
Pfam Myb_DNA-binding 620 665
low_complexity n/a 621 635
disorder n/a 645 646
disorder n/a 682 683
Pfam SWIRM-assoc_3 706 772
low_complexity n/a 710 717
low_complexity n/a 723 734
disorder n/a 733 887
low_complexity n/a 766 783
low_complexity n/a 820 842
low_complexity n/a 866 885
Pfam SWIRM-assoc_1 871 954
disorder n/a 910 1105
coiled_coil n/a 914 945
low_complexity n/a 922 939
low_complexity n/a 955 972
low_complexity n/a 974 988
low_complexity n/a 985 1026
low_complexity n/a 1042 1057
low_complexity n/a 1068 1104

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q92922. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAAAGGGGP GTAVGATGSG IAAAAAGLAV YRRKDGGPAT KFWESPETVS
50
51
QLDSVRVWLG KHYKKYVHAD APTNKTLAGL VVQLLQFQED AFGKHVTNPA
100
101
FTKLPAKCFM DFKAGGALCH ILGAAYKYKN EQGWRRFDLQ NPSRMDRNVE
150
151
MFMNIEKTLV QNNCLTRPNI YLIPDIDLKL ANKLKDIIKR HQGTFTDEKS
200
201
KASHHIYPYS SSQDDEEWLR PVMRKEKQVL VHWGFYPDSY DTWVHSNDVD
250
251
AEIEDPPIPE KPWKVHVKWI LDTDIFNEWM NEEDYEVDEN RKPVSFRQRI
300
301
STKNEEPVRS PERRDRKASA NARKRKHSPS PPPPTPTESR KKSGKKGQAS
350
351
LYGKRRSQKE EDEQEDLTKD MEDPTPVPNI EEVVLPKNVN LKKDSENTPV
400
401
KGGTVADLDE QDEETVTAGG KEDEDPAKGD QSRSVDLGED NVTEQTNHII
450
451
IPSYASWFDY NCIHVIERRA LPEFFNGKNK SKTPEIYLAY RNFMIDTYRL
500
501
NPQEYLTSTA CRRNLTGDVC AVMRVHAFLE QWGLVNYQVD PESRPMAMGP
550
551
PPTPHFNVLA DTPSGLVPLH LRSPQVPAAQ QMLNFPEKNK EKPVDLQNFG
600
601
LRTDIYSKKT LAKSKGASAG REWTEQETLL LLEALEMYKD DWNKVSEHVG
650
651
SRTQDECILH FLRLPIEDPY LENSDASLGP LAYQPVPFSQ SGNPVMSTVA
700
701
FLASVVDPRV ASAAAKAALE EFSRVREEVP LELVEAHVKK VQEAARASGK
750
751
VDPTYGLESS CIAGTGPDEP EKLEGAEEEK MEADPDGQQP EKAENKVENE
800
801
TDEGDKAQDG ENEKNSEKEQ DSEVSEDTKS EEKETEENKE LTDTCKERES
850
851
DTGKKKVEHE ISEGNVATAA AAALASAATK AKHLAAVEER KIKSLVALLV
900
901
ETQMKKLEIK LRHFEELETI MDREKEALEQ QRQQLLTERQ NFHMEQLKYA
950
951
ELRARQQMEQ QQHGQNPQQA HQHSGGPGLA PLGAAGHPGM MPHQQPPPYP
1000
1001
LMHHQMPPPH PPQPGQIPGP GSMMPGQHMP GRMIPTVAAN IHPSGSGPTP
1050
1051
PGMPPMPGNI LGPRVPLTAP NGMYPPPPQQ QPPPPPPADG VPPPPAPGPP
1100
1101
ASAAP                                                 
1105
 

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Checksums:
CRC64:EDA6FF5B0472AEA9
MD5:c7c1f33e46b21db3dc482dc96516ec78

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Myb_DNA-binding 620 - 665 2YUS A 18 - 63 Jmol OpenAstexViewer
SWIRM 452 - 537 5GJK A 451 - 536 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.