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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PHF20_HUMAN (Q9BVI0)

Summary

This is the summary of UniProt entry PHF20_HUMAN (Q9BVI0).

Description: PHD finger protein 20
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 1012 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Tudor_3 89 136
disorder n/a 139 287
Pfam DUF3776 176 260
disorder n/a 289 373
low_complexity n/a 322 331
low_complexity n/a 339 354
disorder n/a 396 423
disorder n/a 433 437
disorder n/a 439 440
disorder n/a 478 545
low_complexity n/a 521 553
disorder n/a 547 611
low_complexity n/a 607 626
disorder n/a 619 620
disorder n/a 627 630
disorder n/a 632 643
disorder n/a 789 818
disorder n/a 820 823
disorder n/a 827 828
disorder n/a 861 912
disorder n/a 917 926
disorder n/a 954 955
low_complexity n/a 975 988

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9BVI0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTKHPPNRRG ISFEVGAQLE ARDRLKNWYP AHIEDIDYEE GKVLIHFKRW
50
51
NHRYDEWFCW DSPYLRPLEK IQLRKEGLHE EDGSSEFQIN EQVLACWSDC
100
101
RFYPAKVTAV NKDGTYTVKF YDGVVQTVKH IHVKAFSKDQ NIVGNARPKE
150
151
TDHKSLSSSP DKREKFKEQR KATVNVKKDK EDKPLKTEKR PKQPDKEGKL
200
201
ICSEKGKVSE KSLPKNEKED KENISENDRE YSGDAQVDKK PENDIVKSPQ
250
251
ENLREPKRKR GRPPSIAPTA VDSNSQTLQP ITLELRRRKI SKGCEVPLKR
300
301
PRLDKNSSQE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV
350
351
DTDPLQDTLS STKESEEGQL KSALEAGQVS SALTCHSFGD GSGAAGLELN
400
401
CPSMGENTMK TEPTSPLVEL QEISTVEVTN TFKKTDDFGS SNAPAVDLDH
450
451
KFRCKVVDCL KFFRKAKLLH YHMKYFHGME KSLEPEESPG KRHVQTRGPS
500
501
ASDKPSQETL TRKRVSASSP TTKDKEKNKE KKFKEFVRVK PKKKKKKKKK
550
551
TKPECPCSEE ISDTSQEPSP PKAFAVTRCG SSHKPGVHMS PQLHGPESGH
600
601
HKGKVKALEE DNLSESSSES FLWSDDEYGQ DVDVTTNPDE ELDGDDRYDF
650
651
EVVRCICEVQ EENDFMIQCE ECQCWQHGVC MGLLEENVPE KYTCYVCQDP
700
701
PGQRPGFKYW YDKEWLSRGH MHGLAFLEEN YSHQNAKKIV ATHQLLGDVQ
750
751
RVIEVLHGLQ LKMSILQSRE HPDLPLWCQP WKQHSGEGRS HFRNIPVTDT
800
801
RSKEEAPSYR TLNGAVEKPR PLALPLPRSV EESYITSEHC YQKPRAYYPA
850
851
VEQKLVVETR GSALDDAVNP LHENGDDSLS PRLGWPLDQD RSKGDSDPKP
900
901
GSPKVKEYVS KKALPEEAPA RKLLDRGGEG LLSSQHQWQF NLLTHVESLQ
950
951
DEVTHRMDSI EKELDVLESW LDYTGELEPP EPLARLPQLK HCIKQLLMDL
1000
1001
GKVQQIALCC ST                                         
1012
 

Show the unformatted sequence.

Checksums:
CRC64:1CDBADC23D007503
MD5:2987f2c4a725c7d0c0dd9860675c88dd

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Tudor_3 89 - 136 3P8D A 89 - 136 Jmol OpenAstexViewer
B 89 - 136 Jmol OpenAstexViewer
3QII A 89 - 136 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.