Summary
This is the summary of UniProt entry COPA1_HUMAN (Q9BXS0).
| Description: | Collagen alpha-1(XXV) chain |
| Source organism: |
Homo sapiens (Human)
(NCBI taxonomy ID
9606)
|
| Length: | 654 amino acids |
| Reference Proteome: |
|
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
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| Source | Domain | Start | End |
|---|---|---|---|
| disorder | n/a | 3 | 28 |
| low_complexity | n/a | 33 | 49 |
| transmembrane | n/a | 34 | 54 |
| disorder | n/a | 62 | 66 |
| disorder | n/a | 72 | 84 |
| disorder | n/a | 88 | 90 |
| disorder | n/a | 93 | 94 |
| disorder | n/a | 104 | 106 |
| disorder | n/a | 113 | 654 |
| Pfam | Collagen | 118 | 165 |
| low_complexity | n/a | 122 | 162 |
| low_complexity | n/a | 187 | 218 |
| low_complexity | n/a | 218 | 233 |
| low_complexity | n/a | 229 | 245 |
| low_complexity | n/a | 272 | 287 |
| Pfam | Collagen | 310 | 372 |
| low_complexity | n/a | 321 | 343 |
| low_complexity | n/a | 346 | 358 |
| low_complexity | n/a | 360 | 388 |
| Pfam | Collagen | 371 | 427 |
| Pfam | Collagen | 447 | 505 |
| low_complexity | n/a | 448 | 466 |
| low_complexity | n/a | 516 | 550 |
| Pfam | Collagen | 574 | 647 |
| low_complexity | n/a | 603 | 615 |
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q9BXS0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MLLKKHAGKG GGREPRSEDP TPAEQHCART MPPCAVLAAL LSVVAVVSCL
50 51
YLGVKTNDLQ ARIAALESAK GAPSIHLLPD TLDHLKTMVQ EKVERLLAQK
100 101
SYEHMAKIRI AREAPSECNC PAGPPGKRGK RGRRGESGPP GQPGPQGPPG
150 151
PKGDKGEQGD QGPRMVFPKI NHGFLSADQQ LIKRRLIKGD QGQAGPPGPP
200 201
GPPGPRGPPG DTGKDGPRGM PGVPGEPGKP GEQGLMGPLG PPGQKGSIGA
250 251
PGIPGMNGQK GEPGLPGAVG QNGIPGPKGE PGEQGEKGDA GENGPKGDTG
300 301
EKGDPGSSAA GIKGEPGESG RPGQKGEPGL PGLPGLPGIK GEPGFIGPQG
350 351
EPGLPGLPGT KGERGEAGPP GRGERGEPGA PGPKGKQGES GTRGPKGSKG
400 401
DRGEKGDSGA QGPRGPPGQK GDQGATEIID YNGNLHEALQ RITTLTVTGP
450 451
PGPPGPQGLQ GPKGEQGSPG IPGMDGEQGL KGSKGDMGDP GMTGEKGGIG
500 501
LPGLPGANGM KGEKGDSGMP GPQGPSIIGP PGPPGPHGPP GPMGPHGLPG
550 551
PKGTDGPMGP HGPAGPKGER GEKGAMGEPG PRGPYGLPGK DGEPGLDGFP
600 601
GPRGEKGDLG EKGEKGFRGV KGEKGEPGQP GLDGLDAPCQ LGPDGLPMPG
650 651
CWQK
654
Show the unformatted sequence. |
| Checksums: |
CRC64:D6DFB4FB157C05A2
MD5:411e92966dd1502fa4cbf6613ba5b7c1
|
TreeFam
Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.
