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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PRXD1_MOUSE (Q9D820)

Summary

This is the summary of UniProt entry PRXD1_MOUSE (Q9D820).

Description: Prolyl-tRNA synthetase associated domain-containing protein 1
Source organism: Mus musculus (Mouse) (NCBI taxonomy ID 10090)
Length: 169 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam tRNA_edit 26 155
low_complexity n/a 48 59

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9D820. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAGSELRAEL EQRLGALAIR TEVVEHPEVF TIEEMMPHIQ HLKGAHSKNL
50
51
FLKDKKKKNY WLVTVLHDRQ INLNDLGKQL GVGSGNLRFA DETAMLEKLK
100
101
VGQGCATPLS LFCDDGDVKF VLDSAFLEGG HEKVYFHPMT NAATMGLSPE
150
151
DFLIFVKATG HDPIILNFD                                  
169
 

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Checksums:
CRC64:C225608758771B7C
MD5:5089d76f0d066bb46875c6b29ee54c93

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;