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7  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: GBRL1_HUMAN (Q9H0R8)

Summary

This is the summary of UniProt entry GBRL1_HUMAN (Q9H0R8).

Description: Gamma-aminobutyric acid receptor-associated protein-like 1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 117 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Atg8 13 116
disorder n/a 90 92

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9H0R8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKFQYKEDHP FEYRKKEGEK IRKKYPDRVP VIVEKAPKAR VPDLDKRKYL
50
51
VPSDLTVGQF YFLIRKRIHL RPEDALFFFV NNTIPPTSAT MGQLYEDNHE
100
101
EDYFLYVAYS DESVYGK                                    
117
 

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Checksums:
CRC64:7F56E345255F564B
MD5:ee5778b7cfeab99b39978083e60b1ca1

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Atg8 13 - 111 2R2Q A 13 - 111 Jmol OpenAstexViewer
B 13 - 111 Jmol OpenAstexViewer
13 - 114 5DPT A 20 - 121 Jmol OpenAstexViewer
5LXH A 13 - 114 Jmol OpenAstexViewer
13 - 115 2L8J A 13 - 115 Jmol OpenAstexViewer
5LXH B 13 - 115 Jmol OpenAstexViewer
13 - 116 5DPT B 20 - 123 Jmol OpenAstexViewer
5LXH C 13 - 116 Jmol OpenAstexViewer
5LXI B 13 - 116 Jmol OpenAstexViewer
D 13 - 116 Jmol OpenAstexViewer
6HOI A 13 - 116 Jmol OpenAstexViewer
B 13 - 116 Jmol OpenAstexViewer
6HOL A 13 - 116 Jmol OpenAstexViewer
B 13 - 116 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.