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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CAD20_HUMAN (Q9HBT6)

Summary

This is the summary of UniProt entry CAD20_HUMAN (Q9HBT6).

Description: Cadherin-20
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 801 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 34
disorder n/a 39 50
Pfam Cadherin 64 156
disorder n/a 130 141
disorder n/a 150 153
disorder n/a 168 171
Pfam Cadherin 170 265
disorder n/a 182 192
low_complexity n/a 247 258
disorder n/a 265 269
disorder n/a 275 280
Pfam Cadherin 279 381
Pfam Cadherin 394 485
disorder n/a 422 424
Pfam Cadherin 498 595
disorder n/a 514 518
disorder n/a 530 531
disorder n/a 542 544
disorder n/a 556 557
low_complexity n/a 620 639
transmembrane n/a 621 640
Pfam Cadherin_C 643 794
low_complexity n/a 650 661
disorder n/a 662 666
low_complexity n/a 665 673
disorder n/a 676 677
disorder n/a 695 696
low_complexity n/a 758 772
disorder n/a 760 762

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9HBT6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MWTSGRMSNA KNWLGLGMSL YFWGLMDLTT TVLSDTPTPQ GELEALLSDK
50
51
PQSHQRTKRS WVWNQFFVLE EYTGTDPLYV GKLHSDMDRG DGSIKYILSG
100
101
EGAGIVFTID DTTGDIHAIQ RLDREERAQY TLRAQALDRR TGRPMEPESE
150
151
FIIKIQDIND NEPKFLDGPY VATVPEMSPV GTSVIQVTAT DADDPTYGNS
200
201
ARVVYSILQG QPYFSVDSKT GVIRTALMNM DREAKEYYEV IIQAKDMGGQ
250
251
LGGLAGTTTV NITLSDVNDN PPRFPQKHYQ MSVLESAPIS STVGRVFAKD
300
301
LDEGINAEMK YTIVDGDGAD AFDISTDPNF QVGIITVKKP LSFESKKSYT
350
351
LKVEGANPHL EMRFLNLGPF QDTTTVHISV EDVDEPPVFE PGFYFVEVPE
400
401
DVAIGTTIQI ISAKDPDVTN NSIRYSIDRS SDPGRFFYVD ITTGALMTAR
450
451
PLDREEFSWH NITVLAMEMN NPSQVGSVPV TIKVLDVNDN APEFPRFYEA
500
501
FVCENAKAGQ LIQTVSAVDQ DDPRNGQHFY YSLAPEAANN PNFTIRDNQD
550
551
NTARILTRRS GFRQQEQSVF HLPILIADSG QPVLSSTGTL TIQVCSCDDD
600
601
GHVMSCSPEA YMLPVSLSRG ALIAILACIF VLLVLVLLIL SMRRHRKQPY
650
651
IIDDEENIHE NIVRYDDEGG GEEDTEAFDI AAMWNPREAQ AGAAPKTRQD
700
701
MLPEIESLSR YVPQTCAVNS TVHSYVLAKL YEADMDLWAP PFDSLQTYMF
750
751
EGDGSVAGSL SSLQSATSDS EQSFDFLTDW GPRFRKLAEL YGASEGPAPL
800
801
W                                                     
801
 

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Checksums:
CRC64:6B8B226519F49C5E
MD5:fad476640fe7b70c95aaccf8bb0c9a46

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.