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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RDR1_ARATH (Q9LQV2)

Summary

This is the summary of UniProt entry RDR1_ARATH (Q9LQV2).

Description: RNA-dependent RNA polymerase 1 EC=2.7.7.48
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 1107 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam RdRP 372 931
disorder n/a 418 419
low_complexity n/a 515 526
low_complexity n/a 580 592
disorder n/a 816 829
low_complexity n/a 1032 1046

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9LQV2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGKTIQVFGF PNGVSAEEVK KFLERLTGSG TVYAIKVRQP KKGGPRVYAI
50
51
VQFTSERHTR LIITAAAERL YYGRSYLKAF EVEQDIVPKP RASLHTISGL
100
101
KMFFGCQVST KKFLTLWSAQ DVCVSFGIGM RKLHFSFSWY QKDYRLELSY
150
151
ENIWQIDLHS PQGRSSKFLV IQVIGAPKIF EKEDQPINLL FGIMDFYSDG
200
201
SDEQWIRTTD FTSSSCIGQS TAFCLELPVH LNVPDFRENF ANYAEHRASS
250
251
FLIESGSSYS SNANTLVPVV DPPPGFSLPF EILFKLNTLV QNACLSGPAL
300
301
DLDFYRLLNQ KKYDRALIDH CLEKLFHLGE CCYEPAHWLR DEYKKWISKG
350
351
KLPLSPTISL DDGLVYMYRV QVTPARVYFS GPEVNVSNRV LRHYSKYINN
400
401
FLRVSFVDED LEKVRSMDLS PRSSTQRRTK LYDRIYSVLR DGIVIGDKKF
450
451
EFLAFSSSQL RENSAWMFAP IDRITAAHIR AWMGDFDHIR NVAKYAARLG
500
501
QSFSSSRETL NVRSDEIEVI PDVEIISLGT RYVFSDGIGK ISAEFARKVA
550
551
RKCGLTEFSP SAFQIRYGGY KGVVAVDPNS SKKLSLRKSM SKFESENTKL
600
601
DVLAWSKYQP CYMNRQLITL LSTLGVTDSV FEKKQREVVD RLDAILTHPL
650
651
EAHEALGLMA PGENTNILKA LILCGYKPDA EPFLSMMLQN FRASKLLELR
700
701
TKTRIFISGG RSMMGCLDET RTLEYGQVVV QYSDPMRPGR RFIITGPVVV
750
751
AKNPCLHPGD VRVLQAVNVP ALNHMVDCVV FPQKGLRPHP NECSGSDLDG
800
801
DIYFVCWDQE LVPPRTSEPM DYTPEPTQIL DHDVTIEEVE EYFANYIVND
850
851
SLGIIANAHT AFADKEPLKA FSDPCIELAK KFSTAVDFPK TGVAAVIPQH
900
901
LYVKEYPDFM EKPDKPTYES KNVIGKLFRE VKERAPPLIS IKSFTLDVAS
950
951
KSYDKDMEVD GFEEYVDEAF YQKANYDFKL GNLMDYYGIK TEAEILSGGI
1000
1001
MRMSKSFTKR RDAESIGRAV RALRKETLSL FNASEEEENE SAKASAWYHV
1050
1051
TYHSSYWGLY NEGLNRDHFL SFAWCVYDKL VRIKKTNLGR RQRQETLERL
1100
1101
DHVLRFG                                               
1107
 

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Checksums:
CRC64:F8FF97691FF82187
MD5:9c61d937027105854c341b7787ee61c9

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;