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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: RT02_HUMAN (Q9Y399)

Summary

This is the summary of UniProt entry RT02_HUMAN (Q9Y399).

Description: 28S ribosomal protein S2, mitochondrial
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 296 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
low_complexity n/a 28 39
disorder n/a 34 37
disorder n/a 40 43
disorder n/a 45 46
Pfam Ribosomal_S2 84 186
Pfam Ribosomal_S2 184 260
disorder n/a 268 296

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9Y399. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATSSAALPR ILGAGARAPS RWLGFLGKAT PRPARPSRRT LGSATALMIR
50
51
ESEDSTDFND KILNEPLKHS DFFNVKELFS VRSLFDARVH LGHKAGCRHR
100
101
FMEPYIFGSR LDHDIIDLEQ TATHLQLALN FTAHMAYRKG IILFISRNRQ
150
151
FSYLIENMAR DCGEYAHTRY FRGGMLTNAR LLFGPTVRLP DLIIFLHTLN
200
201
NIFEPHVAVR DAAKMNIPTV GIVDTNCNPC LITYPVPGND DSPLAVHLYC
250
251
RLFQTAITRA KEKRQQVEAL YRLQGQKEPG DQGPAHPPGA DMSHSL    
296
 

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Checksums:
CRC64:E05A248B09AA1A8B
MD5:cf2b9d37d4dc2f6b4bc69484d642d116

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S2 184 - 260 3J9M AB 184 - 260 Jmol OpenAstexViewer
84 - 186 3J9M AB 84 - 186 Jmol OpenAstexViewer

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.