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1  structure 1  species 0  interactions 4  sequences 1  architecture

Structure: 1AVF

Summary

1avf
PDB entry 1avf: ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH
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PDB entry 1avf

Activation intermediate 2 of human gastricsin from human stomach

Experiment type: X-ray diffraction, resolution 2.36Å
Release date: 2011-07-13
Authors: Khan, A.R., Cherney, M.M., Tarasova, N.I., James, M.N.G.
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 1avf.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 13 328 P20142 72 387 Asp (PF00026)
J 13 328 P20142 72 387 Asp (PF00026)
P 2 21 P20142 18 37 A1_Propeptide (PF07966)
Q 2 22 P20142 18 38 A1_Propeptide (PF07966)

Note: This mapping was provided by the PDBe group.

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