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1  structure 1  species 0  interactions 2  sequences 2  architectures

Structure: 1HDM

Summary

1hdm
PDB entry 1hdm: HISTOCOMPATIBILITY ANTIGEN HLA-DM
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PDB entry 1hdm

Histocompatibility antigen hla-dm

Experiment type: X-ray diffraction, resolution 2.50Å
Release date: 2011-07-13
Authors: Wiley, D.C., Mosyak, L.
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 1hdm.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 15 89 P28067 41 118 MHC_II_alpha (PF00993)
A 100 179 P28067 129 208 C1-set (PF07654)
B 9 82 P28068 27 106 MHC_II_beta (PF00969)
B 93 174 P28068 117 199 C1-set (PF07654)

Note: This mapping was provided by the PDBe group.

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