Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 4  sequences 2  architectures

Structure: 2BC4

Summary

2bc4
PDB entry 2bc4: Crystal structure of HLA-DM
Enlarge image.

PDB entry 2bc4

Crystal structure of hla-dm

Experiment type: X-ray diffraction, resolution 2.27Å
Release date: 2017-10-18
Authors: Nicholson, M.J., Moradi, B., Seth, N.P., Xing, X., Cuny, G.D., Stein, R.L., Wucherpfennig, K.W.
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 2bc4.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

Loading domain graphics...

Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 15 92 P28067 41 118 MHC_II_alpha (PF00993)
A 103 182 P28067 129 208 C1-set (PF07654)
B 9 88 P28068 27 106 MHC_II_beta (PF00969)
B 99 181 P28068 117 199 C1-set (PF07654)
C 15 92 P28067 41 118 MHC_II_alpha (PF00993)
C 103 182 P28067 129 208 C1-set (PF07654)
D 9 88 P28068 27 106 MHC_II_beta (PF00969)
D 99 181 P28068 117 199 C1-set (PF07654)

Note: This mapping was provided by the PDBe group.

View structure

We provide three different tools for looking at three dimensional structures. More...

View the structure of PDB entry 2bc4 in: