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1  structure 1  species 0  interactions 16  sequences 8  architectures

Structure: 4D10

Summary

4d10
PDB entry 4d10: Crystal structure of the COP9 signalosome
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PDB entry 4d10

Crystal structure of the cop9 signalosome

Experiment type: X-ray diffraction, resolution 3.80Å
Release date: 2019-03-27
Authors: Bunker, R.D., Lingaraju, G.M., Thoma, N.H.
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 4d10.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 163 345 Q13098 127 309 RPN7 (PF10602)
A 360 464 Q13098 324 428 PCI (PF01399)
B 309 413 P61201 309 413 PCI (PF01399)
C 258 362 Q9UNS2 258 362 PCI (PF01399)
D 264 363 Q9BT78 264 363 PCI (PF01399)
D 365 406 Q9BT78 365 406 CSN4_RPN5_eIF3a (PF18420)
E 50 164 Q92905 50 164 JAB (PF01398)
E 251 329 Q92905 251 329 CSN5_C (PF18323)
F 36 148 Q7L5N1 36 148 JAB (PF01398)
F 194 307 Q7L5N1 194 307 MitMem_reg (PF13012)
G 52 155 Q9UBW8 52 155 PCI (PF01399)
G 166 215 Q9UBW8 166 215 CSN7a_helixI (PF18392)
H 31 167 Q99627 31 167 CSN8_PSD8_EIF3K (PF10075)
I 163 345 Q13098 127 309 RPN7 (PF10602)
I 360 464 Q13098 324 428 PCI (PF01399)
J 309 413 P61201 309 413 PCI (PF01399)
K 258 362 Q9UNS2 258 362 PCI (PF01399)
L 264 363 Q9BT78 264 363 PCI (PF01399)
L 365 406 Q9BT78 365 406 CSN4_RPN5_eIF3a (PF18420)
M 50 164 Q92905 50 164 JAB (PF01398)
M 251 329 Q92905 251 329 CSN5_C (PF18323)
N 36 148 Q7L5N1 36 148 JAB (PF01398)
N 194 307 Q7L5N1 194 307 MitMem_reg (PF13012)
O 52 155 Q9UBW8 52 155 PCI (PF01399)
O 166 215 Q9UBW8 166 215 CSN7a_helixI (PF18392)
P 31 167 Q99627 31 167 CSN8_PSD8_EIF3K (PF10075)

Note: This mapping was provided by the PDBe group.

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