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Structure: 4GBX

Summary

4gbx
PDB entry 4gbx: Crystal structure of an immune complex at pH 6.5
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PDB entry 4gbx

Crystal structure of an immune complex at ph 6.5

Experiment type: X-ray diffraction, resolution 3.00Å
Release date: 2017-11-15
Authors: Sethi, D.K., Pos, W., Wucherpfennig, K.W.
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 4gbx.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 4 83 P01903 29 108 MHC_II_alpha (PF00993)
A 89 170 P01903 114 195 C1-set (PF07654)
B 13 87 P04229 42 116 MHC_II_beta (PF00969)
B 99 180 P04229 128 209 C1-set (PF07654)
C 15 92 P28067 41 118 MHC_II_alpha (PF00993)
C 103 182 P28067 129 208 C1-set (PF07654)
D 9 88 P28068 27 106 MHC_II_beta (PF00969)
D 99 181 P28068 117 199 C1-set (PF07654)

Note: This mapping was provided by the PDBe group.

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