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Structure: 6CM9

Summary

6cm9
PDB entry 6cm9: Structure of the cargo bound AP-1:Arf1:tetherin-Nef closed trimer monomeric subunit
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PDB entry 6cm9

Structure of the cargo bound ap-1:arf1:tetherin-nef closed trimer monomeric subunit

Experiment type: Electron Microscopy, resolution 3.73Å
Release date: 2019-12-18
Authors: Morris, K.L., Buffalo, C.Z., Ren, X., Hurley, J.H.
Species: Homo sapiens (Human), Mus musculus (Mouse), Human immunodeficiency virus 1

PDBprint

Below is the PDBprint for entry 6cm9.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
B 14 534 Q10567 14 534 Adaptin_N (PF01602)
C 17 177 P84077 17 177 Arf (PF00025)
G 23 574 P22892 23 574 Adaptin_N (PF01602)
H 17 177 P84077 17 177 Arf (PF00025)
L 158 167 Q90VU7 158 167 F-protein (PF00469)
M 157 422 P35585 157 422 Adap_comp_sub (PF00928)
N 6 204 Q90VU7 6 204 F-protein (PF00469)
S 1 142 Q96PC3 1 142 Clat_adaptor_s (PF01217)

Note: This mapping was provided by the PDBe group.

View structure

View Pfam families and other data mapped to the structure of PDB entry 6cm9 in InterPro