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1  structure 3  species 0  interactions 16  sequences 7  architectures

Structure: 6D84

Summary

6d84
PDB entry 6d84: Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer
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PDB entry 6d84

Structure of the cargo bound ap-1:arf1:tetherin-nef (l164a, l165a) dileucine mutant dimer

Experiment type: Electron Microscopy, resolution 6.72Å
Release date: 2019-12-18
Authors: Buffalo, C.Z., Morris, K.L., Hurley, J.H.
Species: Homo sapiens (Human), Mus musculus (Mouse), Human immunodeficiency virus 1

PDBprint

Below is the PDBprint for entry 6d84.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
B 14 534 Q10567 14 534 Adaptin_N (PF01602)
C 17 177 P84077 17 177 Arf (PF00025)
F 14 534 Q10567 14 534 Adaptin_N (PF01602)
G 23 574 P22892 23 574 Adaptin_N (PF01602)
H 17 177 P84077 17 177 Arf (PF00025)
I 17 177 P84077 17 177 Arf (PF00025)
K 23 574 P22892 23 574 Adaptin_N (PF01602)
L 218 227 Q90VU7 158 167 F-protein (PF00469)
M 157 422 P35585 157 422 Adap_comp_sub (PF00928)
N 17 177 P84077 17 177 Arf (PF00025)
O 218 227 Q90VU7 158 167 F-protein (PF00469)
P 157 422 P35585 157 422 Adap_comp_sub (PF00928)
Q 1 142 Q96PC3 1 142 Clat_adaptor_s (PF01217)
S 1 142 Q96PC3 1 142 Clat_adaptor_s (PF01217)

Note: This mapping was provided by the PDBe group.

View structure

View Pfam families and other data mapped to the structure of PDB entry 6d84 in InterPro