Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 4  sequences 1  architecture

Structure: 6GPK

Summary

6gpk
PDB entry 6gpk: Crystal structure of human GDP-D-mannose 4,6-dehydratase (E157Q) in complex with GDP-Man
Enlarge image.

PDB entry 6gpk

Crystal structure of human gdp-d-mannose 4,6-dehydratase (e157q) in complex with gdp-man

Experiment type: X-ray diffraction, resolution 1.47Å
Release date: 2019-04-24
Authors: Pfeiffer, M., Krojer, T., Johansson, C., von Delft, F., Bountra, C., Arrowsmith, C.H., Edwards, A., Nidetzky, B., Oppermann, U., Structural Genomics Consortium (SGC)
Species: Homo sapiens (Human)

PDBprint

Below is the PDBprint for entry 6gpk.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

Loading domain graphics...

Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
A 27 358 O60547 27 358 GDP_Man_Dehyd (PF16363)
B 27 358 O60547 27 358 GDP_Man_Dehyd (PF16363)
C 27 358 O60547 27 358 GDP_Man_Dehyd (PF16363)
D 27 358 O60547 27 358 GDP_Man_Dehyd (PF16363)

Note: This mapping was provided by the PDBe group.

View structure

We provide three different tools for looking at three dimensional structures. More...

View the structure of PDB entry 6gpk in: