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PDB entry 1R54

The applet to the left shows the structure of PDB entry 1R54, along with the Pfam domains that map onto that structure.

The protein backbone is drawn as secondary structure elements, and is coloured according to the Pfam domains found on the structure. Regions of the protein that represent Pfam domains are also surrounded by a semi-transparent molecular surface, representing the van der Waal's surface for the atoms that fall within the domain. Regions of protein that are not assigned to a Pfam-A region are shown in grey.

Molecular surfaces can be turned on and off using the buttons in the table below. Details of the mapping between the PDB structure, UniProt sequence and Pfam domain are also given in the table.

All surfaces are initially drawn as semi-transparent membranes, but you may find it quicker to manipulate the view if the surfaces are drawn as solids. Toggle surface transparency.

PDB UniProt Pfam family Colour Show/hide surface
Chain Start End ID Start End
A 210 409 ADA33_HUMAN 210 409 Reprolysin ( PF01421)   Show
Not assigned to a Pfam-A region   Show

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